Alligator mississippiensis (American alligator): 102571478
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Entry
102571478 CDS
T03087
Symbol
TRPC5
Name
(RefSeq) transient receptor potential cation channel subfamily C member 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amj01009
]
102571478 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102571478 (TRPC5)
Protein phosphatases and associated proteins [BR:
amj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102571478 (TRPC5)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102571478 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102571478
NCBI-ProteinID:
XP_006262625
UniProt:
A0A151NPA7
LinkDB
All DBs
Position
Un
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSVEEKAYLSAVEKGDYASVKHSLQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCITIGLLFPVLSVVYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHVQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSIWYLCKWIHYRLCPGKDSEDEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDDANEDGAGEKAKAKSVSFSIANKKKDFNVSALIKTMSGIDIPDEKPKSNGINKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHLPEPNSEPMYTISDGVIQPHYMWQDIKYSQ
IDKEREENCSKSEINLNEVDYSGNTRHTGQSKECPMVCTSSLHCASSICSSNSKLIDSTE
DVFDSWGDACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaagtaaactactcgccctaccgagatcggatcccactg
cagattgtgcgggcagaggcagagctctccgtggaagagaaggcctacctcagtgctgta
gagaagggcgactatgccagcgtgaaacattccctccaagaggctgaaatctattacaac
atcaacatcaactgtatggatcctcttggacgcagtgcccttttaatagccatagagaat
gaaaacctggagatcatggagttgctgttgagccacagcgtgtacgttggggatgccctg
ctgtacgcgatacggaaggaggtggtgggggctgtggagctgctcctgaattacagaaaa
ccaagtggtgaaaaacaggtccctaccttgatgatggacacgcagttttcagaattcacc
ccggatatcaccccaatcatgctggcggctcataccaacaactatgaaatcatcaaactg
ctagtccaaagacgggtaacaattccgcgccctcaccagatcaggtgcaactgtgtggag
tgtgtctccagctctgaggtggacagcctgaggcattcccggtcgaggctgaacatctac
aaagcgttagccagcccttcgctgattgccttatcgagcgaggaccctattttgacagcc
ttccggctgggctgggagttaaaggagctcagcaaggtggaaaatgagttcaaggcagaa
tatgaagagctctcccagcagtgcaagcgttttgctaaggatcttctggatcaggcacgg
agttccagggagctagaaatcattcttaaccacagggatgatcaaagtgaagagctggat
ccccaaaaatgtcatgatttggctaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccaaactgccagcagttgctagctacactgtggtatgacggctttcca
ggatggaggcggaaacactgggcagtgaaactcttgacctgcatcaccattggactgcta
tttccagtgctttctgtggtgtatttgattgcacctaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggttcttacttaaccttcctcttcatg
ctcctgctggcatcgcagcatatcgtcaggacagatctccatgtgcagggaccaccgccc
accatcgttgagtggatgatcctaccgtgggttctaggttttatttggggagaaatcaag
gagatgtgggatggtggattcaacgagtacatacatgactggtggaatctgatggatttt
gcaatgaactcactctaccttgcaactatctcccttaaaattgttgcctatgtcaagtat
aacggctcccgtccaagggaagaatgggaaatgtggcacccgacgctcattgcagaagcc
ctctttgcaatatccaatattttaagttccttgcgtctcatatccctgtttacagcaaat
tcccacctgggacccttgcagatctctctggggcgcatgctgctagacattctcaaattc
ctcttcatctactgcctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcagaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacactttttgagaccctccagtcactcttctggtctgtgttc
ggtctgttgaatctctacgtcaccaatgtgaaagcccgccatgagttcaccgaatttgtt
ggggccaccatgtttggaacctacaatgttatctccctggttgtgctgttgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccatgcagacattgagtggaag
tttgcaaggaccaagctctggatgagttacttcgatgaaggcgccacactgccccctcct
tttaacattatcccaagtcccaagtcaatctggtacctttgcaagtggattcattatcga
ctgtgtcccggcaaggactctgaggatgaacagaagaggcatgaaaacctaaaaacattt
acagaacggcacgctgacaacctgatccagaatcaacattaccaggaagtgatcagaaat
ctagtaaaaagatacgttgcagcaatgataagaaattccaaaaccaatgaggggttaact
gaagaaaattttaaggaattaaagcaggacatctctagctttcgctatgaagttcttgac
cttctgggaaacaggaaaccccagaggaggagttactccaccagcagcacagaggtctcc
caaaaggatgacgcaaatgaagatggtgctggagaaaaagccaaagccaagagtgtgtct
ttcagcatagccaacaaaaaaaaagactttaatgtgtcagcgctcattaaaactatgtct
gggattgacattccagatgagaagccaaaaagcaatggaataaataagcgctccttcgtc
cgaaatgggaatagagttcaaaggctttcaagctccaagaaagagtccttcaagagactg
ggccttctgttctccaagatgaatggacatctccccgagccaaattcagagcctatgtac
actatttcagacggagttattcagccacattacatgtggcaggacattaaatattctcag
attgataaagagagagaagagaactgttccaaaagtgaaattaacctcaatgaggtggac
tatagtgggaacacgagacatacaggacagagcaaggaatgccctatggtctgtaccagc
tcccttcactgtgcttccagtatttgttcctctaactccaaacttatagactcaacagag
gacgtgtttgactcatggggagatgcttgtgacttgtttataaaccaatggaaagatggg
caggaagatcatgttacaactcggttataa
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