Alligator mississippiensis (American alligator): 102574232
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Entry
102574232 CDS
T03087
Symbol
TLR4
Name
(RefSeq) toll like receptor 4
KO
K10160
toll-like receptor 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
amj04217
Necroptosis
amj04620
Toll-like receptor signaling pathway
amj04621
NOD-like receptor signaling pathway
amj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102574232 (TLR4)
09143 Cell growth and death
04217 Necroptosis
102574232 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102574232 (TLR4)
04621 NOD-like receptor signaling pathway
102574232 (TLR4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102574232 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102574232 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amj04054
]
102574232 (TLR4)
04090 CD molecules [BR:
amj04090
]
102574232 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102574232 (TLR4)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Phagocytosis
Toll-like receptors
102574232 (TLR4)
Pattern recognition receptors [BR:
amj04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102574232 (TLR4)
CD molecules [BR:
amj04090
]
Proteins
102574232 (TLR4)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Hyaluronan
Cell surface receptors
102574232 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_5
Motif
Other DBs
NCBI-GeneID:
102574232
NCBI-ProteinID:
XP_019331492
LinkDB
All DBs
Position
Un
AA seq
870 aa
AA seq
DB search
MVSSSIGFLLDCDAQSWLFLLDFHIWKMLRRGVCSPSTLFTLSLVMPFLSQCSAGNFNPC
LEVVPGLTYRCMDLNLSRVPAEIPPSTQNLDLSFNPLGSLGSNNFSAVPALKFLDLARCC
LQTIENYAFEDLCNLSTLILTGNPLRYLGPSAFFGLSSLRRLIAVETNIFSLADLPIRHL
HTLEELNVGNNHIESLTLPKYFTNLTSLRFLSLQSNRISYISKGQLDVLQERKGPYLTLV
LSLNDIKYIQPGAFEGIQLHELSLRACFNNFTVMKDCLQGLAGLQVNRLILGEFRNIWRV
ENFQNGLLDGLCQVQMQEFVFICFKRFKNNTDTLFECLLDVSTIRFVDLYLSQVSAVPEF
SQVQSLECKLCKFGEVPAVKLSLFKKLRVLRITKSKYLTNFVKGFKDLPSLEVLDLSENE
LSFTMRCSFLLAGTPNLRHLNLSFNNLITLKDPFSCPNGLLSLDFQHSILKNFGTIPLFR
FFTNLTYLDISYTSVQILCECVFWGLESLQVLKMAGNSFKDNSLANNFRNLTQLRTLDVS
NCKLLQVSSSTFANLRNLRDLNISNNRLKTLDSMTFLPLQALTVLDFSNNQLTFLTHTAL
KSLIDRLIYLDLSHNMFDCSCTHLSFFEWVKKQKQLLQNIERMVCSSPVNMKNVSVLNFD
LSNCQLSITLVAVSASMALVAVLIMFLIYKYYFHLYYAVVLLSGCKHSSERGDTYDAFVI
HSSKDVDWVKEELVKTIEEGVPPFRLCIHYRDFVPGVPIVSNIVQEGFLSSRKVIAVISS
HFLESQWCKFEFEIAQSWQFVEGKAGIILIVLEEVDKAMQRRLLGLSRYLRRNTYLEWKD
KEVSKHVFWRQLRTALLDGKTWNHEEVRLM
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggtctccagttccataggcttccttttggactgcgatgctcagtcatggttatttcta
ctggactttcacatctggaagatgctcaggagaggggtttgctccccatcaacactcttc
acgctctctttggtcatgcctttcctgtcacagtgctcagctggcaacttcaatccctgc
ttggaggtggttcctggcctgacttacagatgcatggatttgaatctctccagagttcct
gctgaaatcccgccttccacccagaacctagatctgagtttcaatccactgggatcgctg
ggctcaaataacttctcagcagtccctgcattgaagtttctggatcttgctcggtgttgc
ctccagacaattgaaaattatgcctttgaggatctttgtaacctgtccaccttgattttg
actggaaatcccctccggtaccttggtccatcagccttctttggtttgtcatccctgcga
agactgatagccgtagaaaccaacatattctctctggctgacctccccatcagacactta
cataccctggaggagttgaatgtgggcaacaaccacatagagtctttgacactaccaaaa
tacttcaccaacctgacctccctcagattcctgagccttcaatcaaataggatctcgtac
atctccaaaggacagctggatgttctgcaggaaagaaagggaccctatctcacattagtg
ctgtctttgaatgatataaaatatattcagccaggtgcctttgaaggcattcagctccat
gagctttccttgagagcttgttttaacaatttcacagttatgaaggattgcctccagggt
cttgctggtttgcaggtcaatagactcatcctgggggagttccgtaatatttggagagtg
gagaactttcaaaatgggctcctggatggactgtgtcaagtacagatgcaggagtttgtg
ttcatctgcttcaaaaggttcaaaaataacacggacacgctctttgagtgccttctcgat
gtctccactatccgattcgtggacctctacctcagccaagtgtcagcggttcctgagttc
tcccaagtacaaagcctggaatgcaaattgtgcaagtttggggaggttcctgcggtgaag
ctgtccctcttcaagaagctaagagtgctccggattaccaagagcaagtacctcactaac
ttcgtgaagggctttaaggatctgcctagcctagaggtgctagatctgagtgagaatgag
ctcagtttcaccatgcgctgctcctttcttttggctggaaccccaaatttgaggcacttg
aacctaagtttcaataatctcatcaccttgaaggacccttttagttgcccgaatggactg
ttatccctggattttcagcactcaatactaaaaaactttggtacgatacctctcttccgc
ttcttcacaaatctcacctaccttgatatttcctacactagtgttcagatcttgtgcgaa
tgtgtcttttggggcctggaatccctgcaggtgctcaagatggctggcaactcctttaag
gacaacagcctggccaacaacttcaggaatctaacccagctgcgcaccctggatgtttcc
aattgcaaattgttgcaggtgtcttcaagcacatttgcaaacctccggaacctgcgagat
ctcaacatcagcaacaacaggttgaagactcttgacagcatgaccttcctgcctctgcag
gccctcactgtcttggatttcagcaacaaccagctaacattcctgacgcatacagctctg
aagagcctgatagacaggctgatctacctggacctctctcacaacatgtttgattgttcc
tgcacccatttaagcttctttgagtgggtcaagaaacagaagcagttgcttcaaaacatt
gagaggatggtttgtagtagccctgttaacatgaagaatgtgagtgtgctgaactttgat
ctatccaactgtcagctcagcataaccctggtggctgtttcagcaagcatggcccttgtt
gcagtcctgatcatgttcctgatttacaagtactatttccacctgtactatgcggtggtg
ctgctcagtgggtgtaagcattcctctgagaggggagacacctatgatgcttttgtcatc
cactccagcaaagatgttgactgggttaaagaggagctggtgaaaaccatagaggaggga
gttccccccttccgcctctgcatccactacagagactttgtgcctggggtgcccatcgtc
tccaacattgtccaggaaggattcctgagcagcagaaaggtcattgctgtcatctccagc
cacttcctagagagccaatggtgtaaatttgagtttgagattgcccagtcctggcagttc
gtggagggcaaagctggaatcatcctgattgttctggaggaagtggataaggcaatgcag
cggcgtctgctggggttgtcccggtacctgaggaggaacacctacctggagtggaaggac
aaagaggtcagcaagcacgtcttctggaggcagctgaggacagccttgctagatggcaaa
acatggaaccacgaagaggtcagactaatgtga
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