Alligator mississippiensis (American alligator): 102576188
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Entry
102576188 CDS
T03087
Symbol
EME1
Name
(RefSeq) essential meiotic structure-specific endonuclease 1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03440
Homologous recombination
amj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102576188 (EME1)
03460 Fanconi anemia pathway
102576188 (EME1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102576188 (EME1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102576188 (EME1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
102576188
NCBI-ProteinID:
XP_019349930
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All DBs
Position
Un
AA seq
428 aa
AA seq
DB search
MSLGSDDSEDEVLPTASVFLGPLGRAAPISLLSSDSEDEAPPTLCERLRRKFAAQSSAVP
ASPARKAPAPACRPAPPPPPPAPARGQPRGQDGLKQVAAVLDPALLQADGGGQVLSALQA
LGCACAIEPQPVAGSMAWRRRAAGPAQAEEESWTEEPNVLLLLHTEEFVSMIYNYKQVPL
QEVQSSTDGQKETLRSFVARVMEKIPGKTLALAVVELEKYLRSHKSQSQKRPRQAVPNGS
QKEGQRKRKRQKEKEASGPEVSRLDVEEALVDLQLHTGIQVRCLENWKDLSDFATMFTKS
VAEAPFKRERENTGFSFYLENEWCRGVKVDRSGKGLLQAWQRQIQQFHRVSPDMASAIVS
AYPSPWLLEQAYRRCFSEQEQQNMLADIPVRRGDGVTATSRRIGPELSRRIFLQMTSHNP
DLYLDVTN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgggctcggacgacagcgaggatgaggtgctgccgaccgctagcgtcttcctc
gggccgctgggccgcgccgcgcccatctcgttactcagcagcgacagtgaagacgaggcg
cccccgacgctatgcgagcggctgcgcaggaagttcgcggcccagtcctccgccgtccct
gcctcccccgcgcgcaaggcccccgcccccgcctgccggcccgcgcccccgcccccgccc
cctgccccggcccgggggcagccgcggggccaggacggcctgaagcaggtggcggccgtg
ctggacccagctctgttgcaggcggacggcggagggcaggtgctgagcgccctgcaggcc
ctgggctgcgcctgcgccatcgagccgcagcccgtggctggcagcatggcctggagaagg
agagcggcggggcctgcgcaggcggaagaagagagctggacagaagaacccaacgtcctt
cttttgcttcatacagaggagtttgtgtccatgatctacaactacaaacaggtgcctttg
caggaagtccagtctagcacagatggacagaaggagactttacggagctttgtggctcgt
gtcatggagaagattcctgggaagactctggcactggctgtagtagaactagagaaatac
ctaaggtctcacaagagtcagtcacagaagaggccacgacaggcagtgccaaatggaagc
caaaaggagggacagaggaaacggaaaaggcagaaggagaaggaggcttctgggccagag
gtgtccaggctggacgtggaagaagccttggtagatctgcagcttcacacaggcatccag
gttagatgccttgagaactggaaggaccttagcgactttgccactatgttcaccaagtct
gttgctgaagcgcccttcaagcgggagcgagagaacacgggtttctccttctacctggag
aatgagtggtgccgaggcgtgaaggtagaccgctcagggaaggggctcctgcaggcttgg
cagaggcagattcagcaattccaccgggttagtccggatatggccagtgccattgtgtca
gcctacccttctccttggctgctggagcaggcctatcgcaggtgcttttctgagcaggag
cagcagaacatgctggctgatatccctgtgcgccggggtgatggagtaacagccacctcc
cggcggatcggaccagaactctccagacggatcttcctccagatgacctcccacaatcct
gacctctacctggatgtcaccaactaa
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