Alligator mississippiensis (American alligator): 102576817
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Entry
102576817 CDS
T03087
Symbol
CACNA1D
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04010
MAPK signaling pathway
amj04020
Calcium signaling pathway
amj04218
Cellular senescence
amj04260
Cardiac muscle contraction
amj04261
Adrenergic signaling in cardiomyocytes
amj04270
Vascular smooth muscle contraction
amj04530
Tight junction
amj04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102576817 (CACNA1D)
04020 Calcium signaling pathway
102576817 (CACNA1D)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102576817 (CACNA1D)
09144 Cellular community - eukaryotes
04530 Tight junction
102576817 (CACNA1D)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102576817 (CACNA1D)
09153 Circulatory system
04260 Cardiac muscle contraction
102576817 (CACNA1D)
04261 Adrenergic signaling in cardiomyocytes
102576817 (CACNA1D)
04270 Vascular smooth muscle contraction
102576817 (CACNA1D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102576817 (CACNA1D)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102576817 (CACNA1D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
102576817
NCBI-ProteinID:
XP_019350948
LinkDB
All DBs
Position
Un
AA seq
2188 aa
AA seq
DB search
MHQHQHHHHHQQQQQQQQRPAEGNYASSTRIPLPGDGPIIQSNSSAPSKQTVLSWQAAID
AARQAKAAQTMSTTAAQPVGSLSQRKRQQYAKSKKQGNTSNSRPPRALFCLSLNNPIRRA
CISIVEWKPFDIFILLAIFANCVALAVYIPFPEDDSNSTNHNLEKVEYAFLIIFTIETFL
KIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKEAEGGSHSGGKPGGFDVKA
LRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMH
KSCFLIGTDILVEEDPAPCAFSGNGRQCSVNGTECKGSWVGPNGGITNFDNFAFAMLTVF
QCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKA
RGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEGDEEGKRNTSMPTSETESVNTENV
SGEGENPVCCGKLCQTISKSKFSRRWRRWNRFNRRRCRAAVKSVSFYWLVIVLVFLNTLT
ISSEHYDQPNWLTQIQDIANKVLLALFTCEMLIKMYSLGLQAYFVSLFNRFDCFVVCGGI
VETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFL
FIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYG
GPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKNAR
KESLENKKGDKSEGDQKKSKDSKVTIAEYGEGEDEDKDPYPPCDVPVGEEEEEEEEEPEV
PAGPRPRRISELNMKEKITPIPEGSAFFIFSSTNPIRVGCHRLINHHIFTNLILVFIMLS
SISLAAEDPIRSHSFRNNILGYFDYAFTAIFTVEILLKMTTFGAFLHKGSFCRNYFNLLD
LLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIM
IVTTLLQFMFACIGVQLFKGKFYRCSDEAKQNPEECRGIYIVYKEGDVDNPVVRERVWQN
SDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPIYNYRVEISIFFIIYIIII
AFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFW
YVVNSTGFEYIMFVLIMLNTLCLAMQHYEQSKLFNDAMDILNMVFTGVFTVEMVLKVIAF
KPKGYFSDAWNTFDSLIVIGSIVDVVLSEADHYFTDAWNTFDALIVVGSVVDIAITEVNP
KPTETVTTDESGNSEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYV
ALLIAMLFFIYAVIGMQVFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ACLPGKRCDPESDYNPGEEYTCGSNFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVA
MNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVV
PPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPE
IRRAISCDLQDDEPEENNQEEEEDVYKRNGALFGNHINHVSSDRRDSFQQINTTHRPLHV
QRPSIPSASDAEKNIYAHAGNSMFHNHHNHNSVGKQVPNSTNANLNNANMSKVANGKHPN
VGNHEHRSENGYHSYSRVDHDKHRRSSSKRTRYYETYIRSESGDGHLPTICREDHDVRDY
CNDDHYFGEPEYFSGEEYYEEDSMLSGNRHTSDYNYRYHCHDSDFERPKGYHHPHGFFEE
DDSQICYDAKRSPRRRLLPPTPTPNRRSSFNFECLRRQSSQDDITLSPTFHHRTALPLHL
MQQQVMAVAGLDSSKAHKHSPSRSTRSWATPPATPPNRDRTPYYTPLIQVDRAESTEHMN
GSLPSLHRSSWYTDDPDISYRTFTPASLTVPNDFRHKHSDKQRSADSLVEAVLISEGLGR
YAKDPKFVSATKHEIADACDMTIDEMESAASNLLNGNISSGTNGDMFPILSRQDYELQDF
GPGYSDEEPDTGRYEEDLADEMICITTL
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagcaccagcaccaccaccaccaccagcagcagcagcagcagcagcagcgccca
gcagagggaaactatgcaagtagcaccagaattcctctccctggtgacggaccaattatt
cagtcaaacagttcagcaccatccaagcaaactgttctatcttggcaagctgcaattgat
gctgctagacaagccaaggctgcccaaactatgagcaccacggcagcccaacctgtagga
tctctgtcccaaagaaaacgccagcaatatgccaagagcaaaaaacagggtaatacgtct
aacagtcggccgccccgtgcccttttctgtttgtccctcaataacccaatccgaagagcc
tgcattagtatagtagaatggaaaccatttgacatatttatactactggctatttttgcc
aattgtgtggccttagctgtttacatcccattcccagaagatgattctaattcaactaat
cataacttggaaaaagtagaatatgccttcctgataatttttacaattgaaacatttttg
aagattatagcatatggattattattacaccccaacgcatacgttagaaatggatggaat
ttactggattttgtaatagtaatagtaggattatttagtgtaattttggaacaattaacc
aaagaagcagaaggaggtagccactcaggtggcaaaccaggtggctttgatgtgaaagcc
ctaagagcctttcgtgtattgcgacctctccggctcgtatcaggagtgcccagtttacaa
gttgtcttgaactccattataaaagccatggtccctctgctccatattgcccttttggta
ttatttgtaatcataatttatgctatcataggattggaactttttattggaaaaatgcac
aaatcatgttttcttattggtacagatatattagttgaagaagatccagcaccttgtgcg
ttctcagggaatggacgtcagtgttcagtgaatggcactgaatgtaaaggcagctgggtt
ggaccaaatggaggcataaccaactttgataactttgcctttgcaatgttaactgtgttc
cagtgtataaccatggaaggatggactgacgtgttatactggatgaatgatgctatggga
tttgaattgccatgggtgtattttgtcagtctcgtcatctttgggtcatttttcgtacta
aatcttgttcttggtgtattgagcggagaattttccaaggaaagagaaaaagccaaggcc
cgcggggactttcaaaagctacgtgaaaaacagcagcttgaagaggatctgaaaggatat
ttagactggattacccaggcagaagacattgaccctgagaatgaggagggtgacgaagaa
ggcaaacgcaacacaagtatgcctactagtgaaactgagtctgtgaacacagagaatgtc
agtggagaaggagagaaccccgtatgctgtggaaagctgtgtcaaactatctcaaaatcc
aagttcagtcgacgctggcgtcgctggaaccgattcaatcgaagaagatgtagagctgca
gtaaaatctgtctcattttattggctggttattgtcttagtctttctaaacacattgact
atctcatcagagcattacgatcaacctaactggttgacccagatccaagatattgccaac
aaagttcttctggctttattcacctgtgaaatgttaataaaaatgtacagcttgggccta
caggcttattttgtatccctctttaatcgttttgattgcttcgttgtttgtggtggcatt
gttgaaaccatattggtggagttggaaattatgtcacctcttggaatctcagtgtttcgc
tgtgtccgtcttctacgtatttttaaagtaacaaggcactggacatccctgagcaacttg
gtagcatccttgttaaactcaatgaagtccattgcttcactgttgcttctgcttttcctc
ttcatcataatcttctcattgcttggaatgcagctgtttggaggcaaatttaattttgat
gaaactcaaacaaaacggagcaccttcgataattttccacaagctcttttaactgtattc
cagatcctaaccggtgaagactggaatgctgttatgtatgatggcattatggcatatggt
ggtccatcatcatcaggcatgatagtctgcatatacttcattatcctcttcatttgtggt
aactatatcttgctaaatgtcttcttggccattgctgtggataacttggcagatgctgaa
agtctgaatacagctcagaaagaagaagcagaagaaaaggagaggaaaaagaatgccaga
aaagagagtctggaaaataaaaaaggtgacaaatcggaaggtgaccagaagaagtccaag
gatagtaaggtaacaattgccgaatatggagaaggagaagatgaagataaagatccttat
ccaccttgtgatgtaccagtaggtgaagaggaggaagaggaggaagaagaaccggaagta
ccagctggcccacggccccgaagaatatctgaactgaatatgaaagagaagataacacca
attcctgaagggagtgcctttttcatattcagcagcaccaatccaattcgagtggggtgc
cataggcttatcaaccaccatatttttaccaatctcatccttgtcttcatcatgctgagc
agcatttctttagcagcagaagacccaattcgtagtcattcttttagaaataatatactt
ggttactttgactatgctttcacagccatctttactgttgaaatcctgttaaagatgaca
acttttggagcattccttcataaaggttctttctgtaggaattacttcaatttgctggac
ttgctggttgtgggtgtttctctggtatcatttgggattcagtcaagtgcaatctcagtt
gtgaagatactgagagttttaagagtcttgagacccctaagggcaataaacagagcaaag
ggactgaagcacgttgttcaatgtgtctttgttgctattagaactattggcaatatcatg
attgttacaaccctgctgcagttcatgttcgcctgtattggtgtacagctattcaaggga
aaattctatcggtgtagtgatgaagcaaagcagaatccagaggagtgccgggggatatac
attgtttataaagaaggagatgttgataatccagtggttagagaaagggtttggcaaaac
agtgatttcaactttgacaatgtgctgtctgccatgatggcccttttcactgtttctacc
tttgaaggctggccagcattactatacaaagccatagactcaaatggagagaatgtaggc
ccaatatataactacagagtggagatttccatcttctttatcatatatatcatcatcatt
gctttctttatgatgaacatatttgtcggttttgtcattgttaccttccaagaacaggga
gaacaagagtacaagaactgtgagctggataaaaatcagcgccagtgtgtagaatatgcc
ttgaaggcacgtccactgcgtagatacattccaaaaaatccttatcagtacaagttctgg
tatgtggtgaactccactgggtttgaatacatcatgtttgtcctcatcatgctgaacaca
ctttgcttggccatgcagcactacgaacagtcaaagctttttaatgatgcaatggatatt
ttgaatatggttttcacgggagtattcactgttgaaatggttttgaaagtcattgcattc
aaacccaagggctattttagtgatgcctggaacacgtttgactccctcatcgttattggc
agcatagtagacgtcgttctcagtgaagccgatcactatttcactgatgcatggaacact
tttgatgccttaattgttgttggtagcgtcgttgatattgctataacagaagttaatcca
aagccaactgaaacagtcacaactgatgagtctgggaactctgaagacagcgctagaatc
tccatcacttttttccgtctcttccgggtgatgcgactggtgaagcttctcagcaggggt
gaaggaatccgaactttattgtggacatttattaagtcatttcaggctctgccatatgtt
gctcttctgatagctatgctgtttttcatctatgctgtaatcggaatgcaggtttttggg
aaagttgccatgagagacaataatcaaattaacaggaataacaatttccagactttcccc
caggcagtgttgctgctgttcaggtgtgcaactggggaagcatggcaggaaattatgctg
gcctgtttacctggaaagcgctgtgatccagaatctgattataatccaggggaagaatac
acatgtggaagcaattttgccattatttatttcatcagtttttatatgctctgtgcattt
ttgattatcaacttgtttgtggcagtcatcatggacaattttgattatttgacacgtgac
tggtctattctgggacctcatcatttggatgaattcaaaaggatatggtctgagtatgat
cctgaggcaaagggcagaataaagcatcttgatgtagttacattgttgcgtcgtattcag
cctccacttggctttggcaagttatgtccccatcgagtggcatgcaagaggctagtagcc
atgaacatgccactaaacagtgatggaacagtcatgttcaatgctacattatttgctttg
gtgaggacagctctgaagatcaaaacagaagggaatctagagcaagcaaatgaagaactt
agagcagttataaagaaaatctggaagaaaaccagcatgaagctccttgatcaagttgtt
cctccagctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgcaaagaacaaggactggtggggaaatatcctgcg
aagaacaccacgattgctctacaggcgggactaaggacacttcatgacattggtcctgaa
attcgtcgagctatatcctgtgacttgcaagatgatgagccagaagaaaataatcaagag
gaagaggaagatgtctataaaaggaatggtgccctgtttggaaatcacataaaccatgta
agcagtgatagaagagattcgtttcagcagatcaataccacacaccgtcccctgcatgtc
cagcggccttcaattccatctgcaagtgacgccgagaaaaacatatatgctcatgcagga
aattccatgttccacaatcatcataatcacaactcagtaggaaagcaagttccaaattca
acaaatgccaatctcaataatgccaacatgtccaaagttgctaatggaaagcacccaaac
gttggaaatcatgagcacagatctgaaaacgggtatcactcatactccagagttgatcac
gataaacatagaagatcaagcagcaagagaacacgatattatgaaacttacattaggtca
gaatctggtgatgggcatctacccactatttgccgtgaagatcatgatgttcgagattat
tgcaatgatgatcattattttggagagcccgaatattttagtggagaagaatattatgaa
gaagacagcatgttgtcaggaaacaggcatacatctgactataactacagatatcactgt
catgactctgattttgagcgaccaaaaggttaccatcacccacatgggttttttgaagaa
gatgattcacagatctgttatgatgcaaaaagatctcctagaagacggttgctacctccc
acgccaacaccaaatcgtcgatcttcctttaacttcgaatgcctccgcagacaaagtagt
caagatgatataacactctctcctactttccaccaccgcactgctttaccactgcactta
atgcaacaacaggtcatggctgttgcaggtctggattccagtaaagcacataagcattca
ccaagtcgttcaacacgttcctgggccaccccaccagccacccctcccaacagggaccgt
actccatattacacccctctcatccaagttgacagggctgaatctacagaacacatgaat
ggcagccttccttctttgcataggagctcctggtacacagacgatcctgatatctcctac
cgaacattcacaccagccagtttaaccgtacctaatgactttaggcataaacacagtgac
aaacaaagaagtgcagacagcttggtagaagcagtacttatatctgaaggccttgggcga
tatgcaaaggaccctaaatttgtttcagcgacgaaacacgagattgctgatgcttgtgac
atgactattgatgagatggaaagtgcagcaagtaaccttctcaatggaaacattagcagt
gggaccaatggggatatgtttcccattttaagtaggcaagattatgaacttcaagacttt
ggtccgggttatagtgatgaagaaccagacactggtagatatgaagaggacttagctgat
gaaatgatatgcattacaactttatag
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integrated database retrieval system
