Alligator mississippiensis (American alligator): 102576843
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Entry
102576843 CDS
T03087
Symbol
HDAC4, HDAC9
Name
(RefSeq) histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102576843 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102576843 (HDAC4)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102576843 (HDAC4)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102576843 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102576843
NCBI-ProteinID:
XP_014449728
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MSSQNHPDGLSARDQPVELLNPPRVNHMPSSVDVTATLPLQVAPTSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGLPA
TGPSSGGSGQQDAERLAIPTLQQRISLFPGTHLTPYLSTTTLERDGGTAHNPLLQHMVLL
EQPTAQTPLVTDWYLSGLGALPLHAVVSGDRVSPSIHKLRQHRPLGRTQSAPLPQNAQAL
QQLVIQQQHQQFLEKHKQQFQQQQLHINKMIPKPTEPTRQHESHPEETEEELREHQALLE
EPYSDRVSSQKEVQGLANMVQVKQEPIESDEEETEPQQELEPGQRQAEQELLFRQQALLL
EQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLV
YDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSE
AHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGC
VIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIV
DWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGG
LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT
KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPERVFQQRANANAVQSM
EKVIEIHSKYWHSLQRYASTVGYSLIEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEP
MEEEPPL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaaatcatccagatggactttctgcccgagaccagccagtggaactgctg
aatccacctagagtgaaccacatgcctagttctgttgatgtgactgcaacactgcccttg
caagttgcaccaacttcagttcctatggacctccgtttggaccatcagttttccatgcct
gtgacagagccaacactccgtgaacagcagctccagcaagagctcctggctctcaaacaa
aaacaacaaatccagagacaaatcctcattgctgagttccagaggcagcatgaacagctc
tctcggcagcatgaggcccagctacacgagcacataaaacaacagcaggagatgctagca
atgaaacatcagcaagaactcttggagcaccagaggaagttggaacaacaccgacaggag
caggagctagagaagcagcatagagaacagaaactacagcagctcaaaaataaagagaaa
ggaaaagaaagtgcagtggcaagcacagaagtaaaaatgaaattacaagagtttgtcttg
aataaaaagaaggctttggcacaccggaatctcaaccattgcatttccagtgatccccgc
ttctggtatgggaaaacacagcatagttctcttgaccagagttcacctccccaaagtgga
gtatcaggcacctataaccaccctgtactggggatgtatgattccaaagacgactttcca
ctcagaaaaacagcttctgaacccaatctgaaattacgatccaggctaaaacaaaaagtt
gctgaaagacggagcagcccattgttacggagaaaagatggcccagtggttactgctctt
aagaagcgtccattggatgttacagactctgcatgcaacagtgctcctggatctggtccc
agttctccaaacaacagctccaataacataagtgctgagaatggaattacaggatcagtc
acaagtattcaggcagagaccagcttggctcacagactagtgaatcgcgaaggttcagta
acacagcttcctctctacacatctccttccttgcccaacataacattaggactgcctgca
actggcccttccagcgggggatcaggacagcaggatgctgagagacttgctattccaacc
ttacaacagaggatctctttatttcctggcacccaccttactccctatttgagcactaca
acgttggaaagggatgggggaactgcacacaaccctctcctgcaacatatggtcttactg
gaacaaccaactgcacaaacgcccttagtcacagactggtatctttcaggactgggggca
ctgcccctccatgcagtggtcagtggagatcgggtctccccctcaattcacaagctccgg
cagcaccgcccgctggggcgcacgcagtctgctcccctgccccagaacgcccaagccctc
cagcagttagtgatccagcagcagcatcagcagtttctggagaaacacaaacagcagttc
cagcaacagcaactgcacattaacaagatgataccaaaacctaccgagccaactcgccag
catgaaagccaccctgaggagacggaagaagaattacgagaacaccaagcacttttggag
gagccatacagtgacagagtttcgagtcaaaaggaggtgcaagggttggccaatatggta
caggtgaaacaagaacccattgagagtgatgaagaggaaacagagccacaacaggagcta
gagcctggccagaggcaagctgaacaggagctgctgttccgccagcaagcccttttactg
gagcagcaacgcattcaccagctgagaaactaccaagcatcaatggaggcagctggcatc
ccagtgtcttttggagggcaccggcctctgtcccgggcacagtcctcacctgcttctgcc
acctttcccatgtctgtacaggagccacccactaagccaaggttcacaacaggccttgta
tatgacaccttgatgctgaaacaccagtgtacctgtggaaacacaaacagccacccagag
catgcagggagaatccagagcatctggtcccgccttcaggagacaggcctccgtggcaaa
tgtgagtgcattcgtggaagaaaagcaactctagaagagctacaaacagttcactcagag
gcccatacactgctgtacggaacaaaccctctgaacaggcagaaactggacagcaagaaa
cttctaggttctctaacatcaatgtttgtcaggctcccttgtggtggtgttggagttgac
agtgacacaatttggaatgaggttcattcatctggtgctgctcgcttggctgtggggtgt
gtcattgaacttgtttttaaagtggccacaggagaattaaagaatggatttgctgtagtt
cgacctccaggtcaccatgcagaagaaagtacacccatggggttttgctattttaattct
gtggcaattgcagccaagcttctccaacagagactgaacgttagcaaaatccttatagtg
gactgggatgtacaccatggaaacggtactcagcaagctttctacaatgaccctaatgtt
ctttatatttcactacatcgctatgatgatgggaacttcttcccaggcagtggagctcct
gatgaggtcggcacaggaccaggtgttggtttcaatgttaatatggcctttactgggggc
cttgatccaccaatgggagatacagaatacttaactgctttcagaacggtagtgatgcca
attgccaatgaatttgccccagatgttgtgctggtatcatctggttttgatgctgtggaa
ggtcatcctacacctcttggagggtataatctatcagcaaaatgctttgggtacctgacg
aagcagctgatgggattggccggaggtcgaattgttctggcccttgaagggggtcatgac
ctgacagccatttgtgatgcatctgaagcatgtgtttctgctttgctgggaaacgagctt
gatcctcttccagaaagggttttccagcagcgagcaaatgctaatgccgtgcagtccatg
gaaaaagttattgagatacacagcaagtattggcattcactccagcgttatgcctccacg
gtagggtactccttgattgaggcacagaagtgtgaaaatgaagaagcagaaactgtaaca
gccatggcatccttgtcagtaggtgtgaagccagctgaaaagagaccagatgatgaaccc
atggaagaggagcctcccctgtag
DBGET
integrated database retrieval system