Alligator mississippiensis (American alligator): 109284415
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Entry
109284415 CDS
T03087
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
109284415
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
109284415
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
109284415
NCBI-ProteinID:
XP_019348311
UniProt:
A0A151N7B3
LinkDB
All DBs
Position
Un
AA seq
349 aa
AA seq
DB search
MFRNLTALRSLWLDGNNLTFLHPGTFSALSSLRELDLRGNSRLTSLHANTFRGLLNLASL
DLSFCNIFEIHPLVFSHLPSLQVLDLGSNNMRYIPEAFRSLPSIARLSLASNHIEAIGRD
SLKGLKTLYELNLRKNPIWIIQRDAFTALSGLGVLNLGHNLLSDLPNQLFKGLIRLKTLH
LEANRLTRVGCSLNSLPCLRTLYLNNNRIAYIAGSAFSHLKQLHFLHLSKNNLSYLPSPV
FSGTAKLRYVFLSHNPWNCDCKMLWFSQWRATYKGLVEGLHCAFPALHNRTLLHFVGHEK
SPGCLLSSGPAEDSTCTDSNASAASRPPAVSDTLPLVLLAWCRWHWARM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaacttgactgcccttcgcagcctgtggctagacggcaataacctgaccttc
ctgcacccagggacctttagcgcgctgagcagcttgcgggagctggaccttcgcgggaac
tcgaggctgacgtctctgcacgcgaacactttcagaggactcttgaacctcgccagcttg
gatttatccttctgcaacatctttgaaatccacccgctggtgttttcacacctgccctcc
ttgcaagtgctggacctgggctccaataacatgcgttacatcccagaagccttcaggagc
ttacccagcatcgcaaggctcagcctggccagcaaccacatcgaagccataggcagagac
tccctgaagggcctgaaaaccctctacgaattgaacctccgcaagaatcccatctggatc
attcaaagggacgcatttacggcgctgagcgggctgggcgtgctaaatttaggacacaac
cttctctctgatttgcctaatcagcttttcaaaggtttgatccggctcaagacattgcac
ctggaagccaacagactcaccagggtgggctgctccttgaacagcctgccctgcctgcgg
acgctgtacctgaacaacaaccgcatcgcctacattgccggctcggctttctcccacctc
aagcagctgcatttcctccacttgagcaagaacaacctaagctaccttcccagtcccgtg
ttttccgggacggcgaagctgagatacgtgtttctgtctcacaacccctggaattgcgac
tgcaaaatgctttggttctcgcagtggagagcgacgtacaaagggctggtggaggggcta
cactgcgcctttccagccctccacaacaggaccctgctccactttgtcggtcacgagaaa
tcacctggttgcttattatcgtcggggccggcagaagatagcacgtgtacggacagcaac
gccagcgctgcttctcgcccgccggccgtttccgacaccctgccgctggtcttgctcgct
tggtgccgttggcactgggcaaggatgtag
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