Ailuropoda melanoleuca (giant panda): 100465290
Help
Entry
100465290 CDS
T01329
Symbol
SPAST
Name
(RefSeq) LOW QUALITY PROTEIN: spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100465290 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100465290 (SPAST)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100465290 (SPAST)
Membrane trafficking [BR:
aml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100465290 (SPAST)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100465290 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
TniB
Mg_chelatase
AAA_16
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
AAA_2
DUF4368
MAPEG
Motif
Other DBs
NCBI-GeneID:
100465290
NCBI-ProteinID:
XP_034515570
Ensembl:
ENSAMEG00000007715
LinkDB
All DBs
Position
4:complement(119182574..119236721)
Genome browser
AA seq
617 aa
AA seq
DB search
MNSPGGRGKKKGSGGGSSPVPPRPSPPCLAPAPPAPRPAPPPESPHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPASASASPPAPVPGGEAERVRAFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNNDSTNLTCRNGHLQSESGAVPKRKDPL
THTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPAPTAGTHKSTPKTNRTN
KPSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVI
LPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEG
EKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDR
VLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLAR
MTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQ
TLEAYIRWNKDFGDTTV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggcggcagcagcccggtg
cctcccaggccttcgcccccctgcctggcccccgccccgcccgcccccagaccggccccc
cctcccgagtccccgcataagcggaacctgtactacttctcctacccgctcttcgtaggc
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggctgccaagaggagctcccgggccgcgccggcgtcagcc
tcggcctcgcccccggcgccagtgccgggcggggaggccgagcgcgtccgagccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcagga
caaaaggagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgtcatagttacagggcaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggaccgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggatgtctataataatgacagtactaacttgaca
tgccgcaacggacatctccagtcagaaagtggagctgttccaaaaagaaaagatccctta
acacacactagtaattcactgcctcgttcaaaaacagttatgaagactggatccacaggt
ctgtcaggccaccacagagcacctagttgtagtgggttatccatggtttctggagtgaga
cagggacctgctcccacagctggaactcataagagtacaccaaaaacaaatagaacgaat
aaaccttctacccctacaactgctgctcgtaaaaagaaagacttgaagaattttaggaat
gtggacagcaaccttgctaaccttataatgaatgaaattgtggacaatggaacagctgtt
aaatttgatgatatagctgggcaagagttggcaaaacaagccttgcaagaaattgttatt
cttccttctctgaggcctgagttgttcacagggcttagagctcctgccagaggattgtta
ctctttggtccacctggaaatgggaaaacaatgctggccaaagcggtagctgccgaatct
aatgcaaccttctttaatataagtgctgcaagtttaacttcaaaatatgtgggagaagga
gagaaattggtgagagctctttttgctgtggctcgagaacttcagccttctataattttt
atagatgaagttgatagccttctgtgtgaaagaagagaaggagaacatgatgctagtaga
cgtctaaaaactgaatttctaatagaatttgatggtgtacaatctgctggagatgacaga
gtgcttgtaatgggtgcaactaacaggccacaagagcttgatgaggctgttctcaggcgt
ttcatcaaacgggtttatgtgtctttgccaaatgaggagacacgactacttttacttaaa
aatctgttatgtaaacaaggaagcccactgacccaaaaagaactagcacaactagctaga
atgactgatggatattcaggaagtgatctaacagctttggcaaaagatgcagcattgggt
cctatccgagaactgaaaccagaacaagtaaagaatatgtctgccagtgagatgagaaat
attcgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtgagccctcaa
accttagaagcatacatacgttggaacaaggactttggcgataccactgtttaa
DBGET
integrated database retrieval system
