KEGG   Ailuropoda melanoleuca (giant panda): 100465524
Entry
100465524         CDS       T01329                                 
Name
(RefSeq) LOW QUALITY PROTEIN: patr class I histocompatibility antigen, CH28 alpha chain-like
  KO
K06751  MHC class I antigen
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04144  Endocytosis
aml04145  Phagosome
aml04218  Cellular senescence
aml04514  Cell adhesion molecules
aml04612  Antigen processing and presentation
aml04940  Type I diabetes mellitus
aml05163  Human cytomegalovirus infection
aml05165  Human papillomavirus infection
aml05166  Human T-cell leukemia virus 1 infection
aml05167  Kaposi sarcoma-associated herpesvirus infection
aml05168  Herpes simplex virus 1 infection
aml05169  Epstein-Barr virus infection
aml05170  Human immunodeficiency virus 1 infection
aml05203  Viral carcinogenesis
aml05320  Autoimmune thyroid disease
aml05330  Allograft rejection
aml05332  Graft-versus-host disease
aml05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100465524
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100465524
   04145 Phagosome
    100465524
  09143 Cell growth and death
   04218 Cellular senescence
    100465524
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    100465524
   04612 Antigen processing and presentation
    100465524
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100465524
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100465524
   05170 Human immunodeficiency virus 1 infection
    100465524
   05168 Herpes simplex virus 1 infection
    100465524
   05163 Human cytomegalovirus infection
    100465524
   05167 Kaposi sarcoma-associated herpesvirus infection
    100465524
   05169 Epstein-Barr virus infection
    100465524
   05165 Human papillomavirus infection
    100465524
  09163 Immune disease
   05320 Autoimmune thyroid disease
    100465524
   05330 Allograft rejection
    100465524
   05332 Graft-versus-host disease
    100465524
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100465524
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100465524
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100465524
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aml00537]
    100465524
Exosome [BR:aml04147]
 Exosomal proteins
  Proteins found in most exosomes
   100465524
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aml00537]
 Antigens
  100465524
SSDB
Motif
Pfam: MHC_I C1-set Ig_3 C2-set_2 Ig_2 DUF5134 TM_ErbB1
Other DBs
NCBI-GeneID: 100465524
NCBI-ProteinID: XP_034517581
LinkDB
Position
5:complement(32113863..32119358)
AA seq 477 aa
MTIHNYLKRPGRASAGAGGKGLCGAGARGPPGGDAGPPGNCLSAPPPAADPPAAPXPARA
CAPPSLPASVLRSPTRCPFPCPPGRLHLRPGPRGGRRVGRGLSPSASAGSHSLRYFSIAL
SRPGRGEPRYWEVGYVDDTQFVQFDSDAANPRMEPRAPWVEQERPEYWDQETRGAEDHAR
ISRRNLRVALGCYNQSEAGSHALQGMFGCDVGPDGRLLRGYEQLAYDGAHYIALNEDLRS
WTAADTVXEAAGGAEHSRNYLEVTCVESLRRYLKNXNETLQRAEPPKTHVSHHPISDHDV
TLRCWALGFYPAEITLTWHRDGEDLPQDTELVKTRPAGDGTFQKWAAVVVPSGQEQRYTC
HVQHEALPEPITLRWEPRPQPTVGVIAGLIXFVIAAVVVAVMWRKTRSGRRTGNYCHAVM
TLPRAVMCLSRQLQSETSCLVGTERCKSCPHSHLVTPTTPDSFLCKKCHNVSVFLYA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgactatccataattatctgaaaagacctgggcgggcgagtgcgggggcgggaggaaag
ggcctctgcggggcgggagcgaggggaccgccgggcggggacgcgggacccccggggaat
tgcctctccgcccctccccccgccgcagaccccccagccgcccccngccccgcccgcgcc
tgtgctcccccgtccctccccgcctccgtcctgcgctcccccactcggtgtcccttcccc
tgccctcccggccgcctgcacctgcgccccgggccccgcggcgggaggagggtcgggcgc
ggtctcagcccctcggcgtccgcaggctcgcactccctgaggtatttctccatcgccctg
tcccggcccggccgcggggagccccggtactgggaagtcggctacgtggacgacacgcag
ttcgtgcagttcgacagcgatgcggcgaacccgaggatggagccgcgggcgccgtgggtg
gagcaggagcggccggagtattgggaccaggagacgcggggcgccgaagaccacgcacgg
atttcgcgacggaacctacgggtcgctctcggctgctacaaccagagcgaggcgggctct
cacgccctccaggggatgtttggctgcgacgtggggccggacgggcgcctcctccgcggg
tatgagcagttggcctacgacggcgcgcattacatcgccctgaacgaggacctgcgctcc
tggaccgcggcggacacggtgnnggaggcggccggtggcgcagagcactccagaaactac
ctggaggtcacgtgcgtggagtccctccgcaggtacctgaagaacnggaacgagacgctg
cagcgcgcagaaccgcccaaaacgcatgtgagccaccaccccatctctgaccatgatgtc
accctgaggtgctgggccctgggcttctaccctgcggagatcaccctgacctggcaccgt
gatggggaggacctgccccaggacacagagcttgtgaagaccaggcctgcaggagatggg
accttccagaagtgggcagctgtggtggtgccttctggacaggagcagagatacacgtgt
catgtgcagcatgaggcactgcctgagcccatcaccttgagatgggagccacgtcctcag
cccaccgtgggcgtcattgctggtctgatcntctttgtgatcgctgcggtggttgtagct
gtgatgtggagaaagacgcgctcaggtagaagaacaggaaactactgtcacgctgtgatg
acattgcctagggctgtgatgtgcctctcacggcaactgcagagtgagaccagctgcctt
gtggggactgagcgatgcaagagttgtccacactcccacttggtgacaccaacaacccct
gactcctttttgtgcaaaaagtgtcacaatgtgtctgtgttcctatacgcataa

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