Ailuropoda melanoleuca (giant panda): 100468249
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Entry
100468249 CDS
T01329
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04371
Apelin signaling pathway
aml04613
Neutrophil extracellular trap formation
aml05034
Alcoholism
aml05203
Viral carcinogenesis
aml05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100468249 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100468249 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100468249 (HDAC5)
05203 Viral carcinogenesis
100468249 (HDAC5)
09165 Substance dependence
05034 Alcoholism
100468249 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100468249 (HDAC5)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100468249 (HDAC5)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100468249 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
100468249
NCBI-ProteinID:
XP_034495681
Ensembl:
ENSAMEG00000018326
LinkDB
All DBs
Position
13:complement(27267562..27303007)
Genome browser
AA seq
1134 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPGPAELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GALTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSALIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ
LGKILTKTGELSRQPPTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQGDLEEEE
EDEEEEEEEEEDCIQVKDEEGESGTEEGPDLDESSAGYKKVFSDAQQLQPLQVYQAPLSL
ATVPHQALGRTQSSPAAPGGMKSPPDQPAKHLFTTGVVYDTFMLKHQCTCGNTHVHPEHA
GRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLL
GPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAIIR
PPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVL
YISLHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPI
AHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDL
TAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWSCVQRFAAGL
GRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQEPAL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggctcaggggctcgtggagatgctgcagaccatctatgagacg
gaatcctgtttctcagcagatgggatgtcaggccgggaaccatccttggaaattctgcct
cggacccctctgcacagcatccctgtggcagtggaggtgaagccggtgctgcccggagcc
atgcccagctccatggggggtgggggaggaggcagccccggccccgcggagctgcggggg
gctctggcgggccccgtggatcccgcgctgagggagcagcagctgcagcaggagctcctg
gcgctcaagcagcagcagcagctgcagaagcagctcctgttcgctgagttccagaaacag
cacgaccacctgacacggcagcatgaggtccagctgcagaagcacctcaagcagcagcag
gagatgctggcggccaagaggcagcaggagctggagcagcagcggcagcgggagcagcag
cggcaggaagagctggagaagcagcggctggagcagcagctgctcatcctgcgaaacaag
gagaagagcaaagagagtgccatcgccagcactgaggtgaagctgcggctccaggaattc
cttctgtcgaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcat
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagtggc
ccccctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagccgcgat
gacttccccctccgcaaaacagcctctgaacccaacctgaaagtgcgttcgaggctaaag
cagaaggtggctgagcggagaagtagtcccctcctgcgtcgcaaggatgggacagtcatt
agcacctttaagaagagagcagttgagatcaccggtgccgggcctggggtgtcgtccgtg
tgtaacagcgcgccaggctccggccccagctctcccaacagctcccacagcaccattgct
gagaatggctttactggctcagtccccaacatccccaccgagatgctcccccagcaccgg
gccctccctctggacagctcccccaaccagttcagcctctacacgtctccctctctgccc
aacatctccctagggctgcaggccacagtcactgtcaccaactcacacctcaccgcctcc
ccgaagctgtcaacgcagcaggaggccgagaggcaggccctccagtccctgcggcagggt
ggcgcactgacgggcaagttcatgagcacatcctccatccccggctgcctgttgggcgtg
gcactggagggcgacaccagcccccacgggcacgcctccctgttgcagcacgtgctgctg
ctggagcaggctcggcagcagagcgccctcattgctgtgccactccacgggcagtccccg
ctggtgacaggtgaacgtgtggccaccagcatgcggacagtgggcaagctcccgcggcac
cggcccctgagccgcactcagtcctccccgctgcctcagagcccccaggccttgcagcag
cttgtcatgcagcagcagcaccagcagttcctggagaagcagaagcaacagcagctgcag
ctgggcaagatcctcaccaagactggggagctgtcacggcagccccccacccaccctgag
gagacagaggaggagctgactgagcagcaggaggccttgcttggggagggagccctgacc
atccctcgagaaggctccacggagagtgagagcacgcagggagacctggaggaggaggag
gaggacgaggaggaggaggaagaggaggaggaggactgcatccaggtcaaggatgaggag
ggcgagagtggcactgaggagggacccgacttggacgagtccagtgctggttacaaaaag
gtgttctccgatgcccagcagctgcagccacttcaggtgtaccaggcaccccttagcctg
gccactgtgccccaccaggccctgggccgcacccagtcctcacctgctgcccctgggggc
atgaaaagccccccagaccagcccgccaagcacctcttcaccacaggtgtggtgtacgac
acgttcatgctgaagcaccagtgcacgtgtgggaacacacacgtgcaccccgagcacgcc
ggccggatccagagcatctggtcccggctgcaggagacaggcctgctgagcaagtgtgag
cggatccggggtcgcaaagccacgctggatgagatccagacagtgcactccgaataccac
actctgctctatgggaccagccccctcaaccgacagaagctagacagcaagaagctgctc
ggccccatcagccagaagatgtatgccatgctgccttgtgggggcattggggtggacagt
gacactgtgtggaatgagatgcactcctccagtgccgtgcgcatggcagtgggctgcctg
gtggagctggcttttaaggtggcctcaggagagctcaagaacggatttgccatcatccgg
ccgccgggacaccatgcggaggagtccacagccatgggattctgcttcttcaactctgta
gctatcaccaccaaactcctgcagcagaagctgaacgtgggcaaggttctcatcgtggac
tgggacattcaccatggcaatggcacccagcaagcgttttacaatgacccctctgtgctc
tacatctccctgcatcgctatgacaacgggaacttctttccaggctctggggctcctgaa
gaggttggcggagggccgggcatggggtacaatgtgaacgtggcatggacgggaggtgtg
gacccccccatcggagacgtggagtacctaacggccttcaggacagtggtgatgcccatt
gcccacgagttctcacctgatgtggtcctggtctctgccgggttcgatgctgttgaggga
cacctgtctccactgggtggctactctgtcaccgccagatgctttggccacttgaccagg
cagctgatgacgctggcagggggccgggtggtgctggccctggagggaggccatgacttg
accgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcag
cccttggacgaggcagtcttgcaacaaaagcccaacatcaacgcagtggccacgctagag
aaagtcatcgagatccagagcaaacactggagctgtgtccagaggttcgccgctggtcta
ggccgttccctgcgggaggcccaggcaggtgagacggaggaggcggagactgtgagcgcc
atggccttgctgtcggtgggggccgagcaggcccaggctgctgcagcccgggagcacagc
cccaggccggcagaggagcccatggaacaggagcctgccctgtga
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integrated database retrieval system
