Ailuropoda melanoleuca (giant panda): 100472645
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Entry
100472645 CDS
T01329
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100472645 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472645 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100472645 (NR1D2)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100472645 (NR1D2)
Nuclear receptors [BR:
aml03310
]
1. Thyroid hormone like
1D. Rev-Erb
100472645 (NR1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
LpxD
RseA_C
Motif
Other DBs
NCBI-GeneID:
100472645
NCBI-ProteinID:
XP_034517719
Ensembl:
ENSAMEG00000000517
LinkDB
All DBs
Position
6:25364054..25384308
Genome browser
AA seq
458 aa
AA seq
DB search
MKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKSFSSIAVRFGR
IPKREKQRMLIEMQSAMKTMMNSQFSGHLQNDTLEHHEQTALPAQEQLRPKPQLEQENIK
SSSPSSDFAKDEVIGMVTRAHKDTFMYNQEQRENSAETMQPQRERIPKTMEQYNLNHDHC
GSGLSSHFPCSESQQHLNGQYKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVSID
GFSQNENKNSYLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAK
RIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGD
LLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIM
KNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagcaaatcaagtgcacctgggatgacaaagagtcatagtggagtgacaaaa
tttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtcaggattccactat
ggagttcatgcttgtgaaggctgtaagtctttttcttcaatagctgttcggtttggtcgt
attcctaagcgtgaaaaacagaggatgctaattgaaatgcagagtgcaatgaagaccatg
atgaacagccagttcagtggtcatttgcagaatgacacattagaacatcatgaacagaca
gccttaccagcccaggaacagctgcgacccaagccccagctggaacaagaaaacatcaaa
agctcttctccctcttctgattttgcaaaagatgaagtgattggcatggtaacccgggcg
cacaaggatacctttatgtataatcaagagcagcgagaaaactcagcagagaccatgcag
cctcagagagaacggattcccaagaccatggagcaatataatttaaatcacgaccattgt
ggcagtgggcttagcagccattttccatgtagtgagagccagcagcacctcaatggacag
tacaaagggaggaacataatgcattacccaaatgggcatgccatttgtattgcaaatgga
cattgtatgaacttctccaatgcttatactcaacgagtatgtgatagagtttcgatagat
ggattttctcagaatgagaacaagaatagttacctgtgcaacactggagggagaatgcat
ctggtttgtccaatgagtaagtctccgtacgtggatcctcataaatctgggcatgaaatc
tgggaagaattttcaatgagcttcaccccagcagtgaaagaggtggtggaatttgcaaag
cgtattcctggattcagagatctctctcagcatgaccaggtcaaccttttgaaggctggg
acttttgaggttttaatggtacgatttgcatcattgtttgatgcaaaggagcgtacggtc
acctttttaagtggaaagaaatatagtgtcgatgacttacactcaatgggagcaggcgat
ctgctaaactctatgtttgaatttagtgagaagctaaatgccctccaacttagtgatgaa
gagatgagtttgtttacagctgttgtcctggtatccgcagatcgatctggaatagaaaac
gtcaactctgtggaggctttgcaggagactctcatccgtgcactaaggaccttaataatg
aaaaaccatccaaacgaggcctctatttttacaaaacttcttctaaagttgccagatctt
cgatctttaaacaacatgcactctgaggagctcttggcctttaaagttcacccctaa
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