Ailuropoda melanoleuca (giant panda): 100472857
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Entry
100472857 CDS
T01329
Symbol
SHOX2
Name
(RefSeq) short stature homeobox protein 2 isoform X1
KO
K09331
short stature homeobox protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472857 (SHOX2)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100472857 (SHOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Sporozoite_P67
MRP-L20
Motif
Other DBs
NCBI-GeneID:
100472857
NCBI-ProteinID:
XP_011222721
Ensembl:
ENSAMEG00000013513
LinkDB
All DBs
Position
1:102270138..102280643
Genome browser
AA seq
328 aa
AA seq
DB search
MEELTAFVSKSFDQKVKEKKEAITYREVLESGPLRGTKEPTGCAEPGRDDRSSPAVRAAG
GGGGGGGGGGGGGGGGGGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEVSPELKDR
KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR
VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPL
SFQVQAQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAA
AAAKTTSKNSSIADLRLKAKKHAAALGL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttacggcgttcgtctctaagtctttcgaccagaaagtgaaggagaagaag
gaggcgatcacgtaccgagaggtgctggagagcgggccgctgcgcgggaccaaggagccg
acgggctgcgcggagcccggccgcgacgaccgcagcagcccggcagtccgggcggccggc
ggaggcggcggcggaggaggaggcggaggcggaggcggaggaggcggaggaggaggagca
ggcggaggagctggaggagggcgctctcccgtccgggagctggacatgggcgccgctgag
agaagcagagagccgggcagcccgcggctcaccgaggtgtccccagagctgaaggatcgc
aaagaggatgcgaaagggatggaggacgaaggccagaccaaaatcaagcagaggcgaagt
cggaccaatttcactctggaacaactcaacgaactggagaggctttttgatgagacccac
tacccagacgctttcatgcgcgaggaactgagccaacggctggggctgtccgaagcccga
gtgcaggtttggtttcaaaatcgaagagcaaaatgtagaaaacaagaaaatcaactccat
aaaggtgttctcataggggctgccagccagtttgaagcttgtagagttgcaccctatgtc
aatgtaggtgctttaaggatgccatttcagcaggatagtcattgcaacgtgacgcccttg
tcctttcaggttcaggcgcagctgcagctggacagcgccgtggcgcacgcgcaccaccac
ctgcacccgcacctggccgcgcacgcgccctatatgatgttcccggcgccgcccttcgga
ctgccgctagccacgctggccgcggactcagcctccgccgcctccgtggtggctgccgcc
gccgcagccaaaaccaccagcaagaactccagcatcgccgatctcagactgaaagccaaa
aagcacgctgccgccctgggtctgtga
DBGET
integrated database retrieval system
