Ailuropoda melanoleuca (giant panda): 100474885
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Entry
100474885 CDS
T01329
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04151
PI3K-Akt signaling pathway
aml04510
Focal adhesion
aml04512
ECM-receptor interaction
aml04611
Platelet activation
aml04820
Cytoskeleton in muscle cells
aml04926
Relaxin signaling pathway
aml04933
AGE-RAGE signaling pathway in diabetic complications
aml04974
Protein digestion and absorption
aml05146
Amoebiasis
aml05165
Human papillomavirus infection
aml05205
Proteoglycans in cancer
aml05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100474885 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100474885 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100474885 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100474885 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100474885 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
100474885 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
100474885 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100474885 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100474885 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
100474885 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
100474885 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100474885 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100474885 (COL1A2)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100474885 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
100474885
NCBI-ProteinID:
XP_002918275
Ensembl:
ENSAMEG00000017486
UniProt:
G1MH95
LinkDB
All DBs
Position
1:144306102..144341186
Genome browser
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPAGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSVGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGP
PGPRGSTGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPSGEPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGVPGGKGEKGE
TGLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGP
PGFAGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGT
VGAPGPHGPVGPTGKHGNRGEPGPAGAVGPVGAVGPRGPSGPQGVRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNVEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYMDEETGNLKKAVMLQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWGKTIIEYKTNKPSRLPILDIAPLDIGGADQEFRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttacaagaggcaactgcaaggaagggcccagctggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgatggcatcccaggc
cctcctggtccacctggtcctcctggcccccctggtcttggcgggaactttgcagctcag
tacgatcctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctcga
gggccacctggtgcgtctggagctcctggccctcaaggtttccaaggacctgctggtgag
cctggtgaacctggtcaaactggtcctgcgggtgctcgtggtccacctgggcctcctggc
aaagctggggaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgcccgtggtttccctgggactcctggacttcctggcttcaaaggcatt
aggggacacaatggtctggatggattgaagggacagcccggtgctccaggtgtgaagggt
gaacctggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcct
ggtgagagaggacgcgttggtgcccctggtccagctggtgcccgtggaagtgatggaagt
gtgggtcccgtgggtcctgctggtcccattgggtctgccggccctccaggcttcccaggt
gctcctggccccaagggtgaactcggacctgttggtaaccctggtcctgctggtcctgcg
ggtccccgtggtgaagtgggtcttccaggtgtctccggccccgttgggcctcccggtaac
cctggagccaatggcctgactggtgctaagggtgctgctggcctgcccggtgttgctggg
gctcccggcctccctggaccccgtggaattcctggtcctgttggtgctgctggtgctacc
ggtgccagaggactcgtcggtgagcctggtccagctggttccaaaggagagagtggcaac
aagggtgagcccggttctgttgggccccaaggtcctcctggtcccagtggtgaagaagga
aagagaggccccaatggtgaagccggatctgctggcccctctggacctcctgggctgaga
ggaagtcctggttctcgtggtcttcctggagctgatggcagagctggcgtcatgggccct
cccggccctcgtggttcaaccggccctgctggtgtgcgaggtcccaacggagattctggt
cgccctggagagcctggcctcatgggaccccgaggttttcctggtgcccctggaaacgtt
ggcccagctggtaaagaaggtcccatgggcctccctggtattgacggcaggcctggaccg
attggcccagctggagcaagaggggagcctggcaacatcggattccctggacccaaaggc
cccagtggtgaacctggcaaagctggtgagaaaggtcatgctggtcttgctggtgctcgg
ggtgctccaggtcctgatggaaataatggtgctcaggggcctcctggaccacaaggtgtc
caaggtggaaaaggcgaacagggtcctgctggtcctccaggcttccagggtctgcctggc
cctgcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcccgctggtcccagaggggagcgcgggccccctggggaaagtggtgct
gctggtccttctggtcctattggaagccgaggtccttctggaccccctgggcccgatgga
aacaagggtgaacctggtgtgcttggtgctccgggcaccgcgggtccatctggtcccggc
ggactcccaggagagaggggtgctgctggcgtacctggaggcaagggagaaaagggtgaa
actggtctcagaggtgaagttggtaacccaggcagagatggtgcccgtggtgctcctggt
gccgtaggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtcctgcc
ggtcctgccggtcctgctggtcctcgaggtagccctggtgaacgtggtgaggttggtccc
gctggccccaatggatttgcgggtcccgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggtcctgttggtcccacaggccccgtc
ggctctgctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgat
ggtggcccccctggtgctactggtttccctggtgctgctggacgaactggtcctcctggg
ccctctggtatcaccggccctcctggtccccctggtgctgctggtaaagaaggactccgt
gggcctcggggtgaccaaggtccagttggccgaacgggagaaacaggtgcacatggtccc
cctggctttgccggcgagaagggtccctctggagagcccggtaccgctggccctcctggc
accgcaggtcctcaaggtctccttggtgctcctggcattctgggtctcccaggctctcga
ggtgaacgtggtctaccaggtgtttctggatctgtgggggaacccggacctctaggcatc
gctggtccacctggggctcgtggtccccccggggctgtgggtgcccctggagtcaacggc
gctcctggtgaagctggtcgtgatggcaaccctgggaacgatggtcccccaggccgcgat
ggtcaacccggacacaagggagagcgcggttaccctggcaacattggacccgttggcact
gtgggtgcccctggtcctcatggccccgtgggtcccactggcaaacatggaaaccgtggt
gaacctggtcctgctggtgctgtgggtcctgtcggagctgttggtccaagaggtcctagt
ggcccacaaggtgttcgaggtgataagggagagcctggtgacaaggggcccagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggtcaacatggc
gatcaaggtgcacctggctctgtgggtcctgccggtcctaggggtcctgctggtccttct
ggccctgctggcaaagacggtcgcactggacatcctggtacagtcggacctgctggcgtc
cgtggctctcaggggagccaaggtcctgctggtcctcctggtccccctggtcctcctggc
cctcctggcccaagtggtggtggctatgactttggttatgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacctaaggattatgaagttgatgctactctg
aaatccctcaacaaccagatcgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagactcagccaccccgagtggagcagcggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggtgaaacctgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaaat
tccaaggtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaa
tataatgttgaaggagtaaccaccaaggaaatggccactcaactcgccttcatgcgcctg
ctggccaaccatgcctctcagaacatcacctaccactgcaagaacagcattgcctacatg
gacgaggaaactggcaacctgaaaaaggctgtcatgctgcaaggctccaatgatgttgaa
ctggttgccgagggcaacagcaggttcacctacaccgttcttgtagacggctgctctaaa
aagacaaatgaatggggaaagacaatcattgaatacaaaacaaataagccatcccgcctg
cctatccttgatattgcgcctttggacatcggtggtgctgaccaagaattcagggtggac
gttggcccagtctgtttcaaataa
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