Ailuropoda melanoleuca (giant panda): 100475257 Help Entry 100475257         CDS       T01329                                  Symbol COL7A1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:aml00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     100475257 (COL7A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA VWA_2 Pur_ac_phosph_N Kunitz_BPTI DUF4992 Motif Other DBs NCBI-GeneID:  100475257 NCBI-ProteinID:  XP_034514158 Ensembl:  ENSAMEG00000000748 LinkDB All DBs Position 4:complement(17324153..17355099) Genome browser AA seq 2938 aa AA seqDB search MRLPLLAAALCAGILAGALRVRAQHRERVTCTRLYAADIVFLLDGSSSIGRGNFREVRGF LEGLVLPFSGAASAQGVRFAAVQYSDDPRTEFGLDALGSGGDVIRAIRELSYKGGNTRTG AAILHVADHVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNADP EELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPTDDLTSGPRDLVL SEAGSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERREVSVPAGETSTQLQGLRPL TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTTHSLLVAWRSVPGATGYRVTW RVLRGGVTQQQELGPAQGSVLLRDLEPGTDYEVTVSSLLGRSVGAATSLTARTDASVEQI LRPVILGPTSILISWNLVPEARGYRLEWRRESGLGAPQKVVLPSDVTRYQLDGLQPGTEY RLTLYTLLEGREVATPAAVVPTGPELPVGPVTDLQAIELPGQRVRVSWSPVPGATEYRIA VRSTQGVERTLVLPGSQTAFDLDDVRAGLSYTVQVSARVGTREGGASILTVRRELETPLA IPGLRVVASDATRVRVAWGPVPGASGFRISWRTDSGPESSQTLPPESTATDILGLRPGTS YQVAVSALRGREEGPPVVVVAQTDPLGPVRTVHVTQTSSSSVTIAWNRVPGATGYRISWH AGHGPEKSQLVSGEATVAELDGLEPDTEYTVRVWAHVAGVDGTPASVVVRTDPAPVGSVS KLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQVLPGNTDSAEIRGLEGGVSY SVRVTALVGDREGAPVSIVVTTPPEAPPALETLRVLQRGEHSLRLRWQPVPGAQGFRLRW RPEAPGGQEQSRILGPDLNSYELDGLEPATLYRIWLSVLGSTGEGPPTEVTAHTESPRVP STELRVVDTSVDSVTLAWTPVSGVSSYILSWRPFRRPGQDIPGASQTLPGITSSQQVTGL EPGISYTFSLIPIREGVRGPEASVTQIPVCPHGLMDVVFLLHTTQDNAHRAEAVKRALER LVSALGPLGPQAVQVGLLSYSHRPSPLFPLNSSYDPGVILQKIRNIPYVDPSGNNLGTAV VTAHRHLLAPDAPGRRQHVPGIMVLLVDEPLRGDIFNPIREAQAAGLKVMILGQAGADPE QLRRLVPGTDPVQTFFAVDDGPSLERAVSSLATSLCRIGSATQPQPEPCTVHCPKGQKGE PGEMGVKGQAGPPGPPGLPGRIGVPGPQGPPGSTAAKGERGFPGADGPPGIPGLPGTPGS PGSKGSPGWPGPRGEPGERGPRGPKGEPGEPGQVIGGEGPGLPGRKGDPGPPGLPGSRGP LGDPGPRGPPGLPGTAVKGDKGDRGERGPPGSGDGGTAPGEPGLPGLPGSPGPQGPVGPS GQKGEKGDCEDGAPGLPGQPGSPGERGLRGPPGDIGPKGDRGLKGAVGETGEKGERGSAG PVGPQGLPGVAGRPGAEGPEGPPGPAGRRGEKGEPGRPGDPAVGPDGAGAKGEKGDVGPA GPRGAAGVKGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDSGRPG PSGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDG RNGSPGPSGPKGDRGEPGPPGLPGRLVDPGLRAGEKGEPGDRGQEGPRGPKGDPGPPGAS GERGVSGLQGPAGPQGDPGVRGPAGEKGDRGPPGLDGRGGLDGKPGATGPPGLHGATGKA GDPGRDGLPGLRGEHGPPGPPGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS GAPGREGHDGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNMGPKGDRGETGPKG EQGLPGERGLRGDPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPMPERRRGPKG EPGERGPPGKEGRIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIP GLPGPAGGTGEAGRPGERGERGEKGERGEQGRDGTPGLPGPPGPPGPKVTVEEPGPGLSG VQGPPGFKGAKGEPGSDGDQGPKGDRGVPGLKGDRGEPGQRGLDGSLGLPGERGVAGPEG KPGLQGPRGTPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGA VGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGAGGKDGDRGAPGVPGSPGLPGP VGPKGEPGPMGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG RAGEPGDPGEDGHKGTPGLKGSKGDAGVGVQGPPGPAGPLGLKGDVGPPGPPGAPGVVGF PGQTGPRGEMGQPGPSGERGLAGLPGREGAPGPSGPPGPPGSTGVPGASGLKGDKGDPGA GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGASGLKGDKGDAAIA VGPPGPRGAKGDMGERGPPGIDGDKGPRGESGNPGEKGPKGEPGDKGSAGLLGARGLTGP KGEPGAAGIPGDPGFPGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGE AGPPGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGL PGTGGFPGPRGSDGATGPPGPPGSVGPKGPEGLQGQKGERGPPGERVVGAPGAPGTPGER GEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTAS PQLHPVPVLRVSHAEEEGRVPPEDDEYEYSEYSVEEYRDPEAPRVGDDPCLLPLDEGTCT AYTLRWYHRAAAGGTEACHPFVYGGCGGNANRFGTREACERRCLPGVVQNQGTGAARS NT seq 8817 nt NT seq  +upstreamnt  +downstreamnt atgaggctgccgctcctggcggccgcgctctgcgccgggatcctggcaggggcgctccgc gtgcgggcccagcaccgggagagagtgacctgcacacgcctttatgcggctgacatcgtg ttcctacttgacggctcttcgtccatcggccgtggcaacttccgcgaagtgcgaggtttc ctggagggactggtgctgcccttctctggggcagccagtgcacagggcgtgcgcttcgcg gccgtgcagtacagcgacgatccccggacagagtttggcctcgatgcccttggctcaggg ggtgacgtgatccgagccatccgtgagctcagctacaaggggggcaacacgcgcacaggg gctgcgattctccacgtggctgaccacgtcttcctaccccagctggcccgacccggtgtc cccaaggtctgcatcctcatcacagacgggaagtcccaggacctggtggacacagctgcc cagcggctgaaggggcagggggtcaagctgtttgctgtggggatcaagaatgccgacccc gaggagctgaagcgagttgcctcacagcccaccagtgatttcttcttcttcgtcaacgac ttcagtatcttgaggacgctgctgccccttgtttcccggagagtgtgcacaactgctggt ggcgtgcccgtgaccctgcccactgatgacttgacctctggtccccgagacctggtgctg tctgaagcaggcagtcaatccctgagggtacagtggactgcagccagtggccctgtgact ggctacaaggtccagtacactcctctgacagggctgggacagccactgccgagcgagcgg cgggaggtgagcgtccccgctggtgagaccagcacgcagctgcaaggtctccggccactg accgagtaccaagtgactgtggtagccctctacgccaatagcatcggggaggccgtgagt gggacagctcggaccactgccctggaggggccggagctgaccatccagaataccacgacc cacagcctcctggtggcttggcggagtgtgccgggtgccactggctaccgtgtgacatgg agggtcctcaggggtggtgtcacacagcagcaggagctgggccccgcgcaggggtcagtg ttgctgcgtgacctggagcctggcacagattacgaggtgactgtgagcagcctgcttggc cggagcgtcggggctgccacctccctgactgcccgcactgacgcctccgttgaacagatc ctgcgcccagtcatcctgggccccacgtccattctcatttcctggaacttggtgcctgag gcccgtggctaccggctggaatggcggcgtgagagcggcttgggggcaccacagaaggtg gtgctgccctctgatgtgacccgctaccagttggacgggctgcaaccgggtaccgagtac cgcctcacgctctacacgctgctggagggccgcgaggtggccacacctgcagccgtggtc cccactgggccagagctgcccgtggggcctgtgacagacctgcaggcaattgagctgcct gggcagcgagtacgagtgtcctggagcccagttcctggtgccaccgagtaccgcattgct gtgcgcagtacccagggggttgaacggaccctggtgcttcctggaagtcagacagccttt gacttggatgatgtccgggctgggctaagctacaccgtgcaggtgtctgctcgagtgggc acccgtgagggtggcgccagcatcctcacggtccgccgcgaactggaaaccccacttgcc atcccagggctacgagtcgtggcatcagatgcaacacgagtgagggtggcttggggacct gttcctggagccagcggatttcggattagctggaggacagacagtggtccggagtccagc cagacattgcccccagaatccactgccacagatatcctggggctgcggcctggaacttcc taccaggtggctgtgtcagcactgcgaggaagagaggagggtccccctgtggtcgtcgtg gctcagactgacccactgggcccagtgaggactgtccatgtgacgcagaccagcagctca tctgtcaccattgcctggaacagagttcctggtgcaacaggatacaggatctcctggcac gcaggccatggtccagagaaatcccagttggtttccggagaggccacagtggctgagctg gatgggctggagccagatactgagtacacagtgcgtgtgtgggcccatgtggctggtgtg gatgggacccccgcctctgtggttgtgaggacagaccctgcgcccgtgggcagtgtgtcg aagctgcagatcctcaatgcttccagtgatgttctgcgggtcacctgggtgggggtcact ggagccacagcctacagactggcctggggccgcagcgagggtggccccacgagacagcag gtgctcccgggaaacacggactccgcagaaatacggggcctcgaaggcggagtcagctac tctgtgcgagtgactgcacttgtcggggaccgtgagggcgcgccggtctccattgtcgtc actacaccgcctgaggctccgccagccctggagacccttcgcgtcctgcagcgaggggag cactcgctgaggttgcggtggcagccggtgcctggggcacagggcttccgtctgcgttgg cgacccgaggccccaggtggccaggaacagtcccggatcctggggcccgatctcaacagc tatgaactggatgggctagaaccagccaccctataccgcatatggctgagtgttttgggg tcgactggagaagggccccccacagaagtgactgcacacactgagtcaccccgtgttcca agcactgaactgcgtgtggtggacacttcagttgactcagtgactctggcctggactcca gtatctggagtatccagctacatcctgtcctggcggccattcagacggcctggccaagac atccctggggcctcacagacacttccagggatcacgagctcccagcaggtgacagggcta gagcctggcatctcctacaccttctcgctgatacccatccgggagggtgtacggggtcct gaggcctctgtcacgcagatcccagtgtgtccccatggcctgatggatgtggtgttcctg ctgcacaccactcaggacaatgctcatcgtgcagaggctgtaaagcgagccctggagcgt ctggtgtctgcacttgggcctcttgggccacaggcggtccaggttggcctcctgtcctac agccatcggccctccccactgttcccgctgaacagctcctatgatcctggcgtcatcctg cagaagatccgcaacatcccctacgtggacccaagtgggaacaacctgggcaccgctgtg gttactgctcacagacacctgttagcgccggatgctcctgggcgccgccagcacgtacca gggataatggttttgctagtagatgagcccttgagaggtgacatcttcaaccctatccgt gaggcccaggctgctgggctcaaagtgatgatcttgggccaggccggagctgacccagaa cagttgcgtcgcttggtgccaggcacggaccccgtccagactttctttgctgtggatgat ggtccaagcttggaacgggcagtcagtagtttggcaacatccctgtgtcggattggttcg gccacccagccacaaccagagccttgcactgtgcattgtccaaagggccagaagggggaa cctggagagatgggtgtgaaaggacaagctgggcctcctggcccccctggccttccgggc aggattggtgttcctggcccccaagggcccccaggaagtaccgctgcaaagggtgagagg ggcttccctggggcagatgggcctccaggcatccctggcctccctgggactcccggaagc cctggctcaaagggctccccagggtggcctggtcctcgtggagaaccaggagagcgagga cctcgaggcccgaagggggagccgggagagcctggacaagtcattggaggcgaaggccca gggcttcctgggcggaaaggggaccctggacctccaggcctccctggatcccgtggccca ctgggggacccaggaccccgtggtcccccaggacttcctggaacagctgtgaagggtgac aaaggcgatcgtggggagcggggccctccaggatcaggtgatggtggcaccgctccaggg gagcctgggctgccgggtcttcctggaagccctggaccccaaggccctgttggcccctct ggacagaaaggagaaaagggtgactgtgaggacggagccccaggcctcccaggacaacct gggagcccaggtgagcggggcctccgaggacctcctggagacattggccccaaaggtgac agaggactgaaaggagctgtgggtgagactggagagaagggtgaacgtggatccgctggc ccagtgggaccccaggggctgcctggagtggctggacgtccgggagctgaggggcctgaa gggccaccgggacctgctggccgccgaggagagaagggggagcctggtcgccctggggac cctgcagtgggacctgacggtgccggggccaaaggagagaagggagatgtggggcctgct gggcccagaggagctgcaggagtcaaaggggaaaggggcccacctggcttggttcttcct ggagaccctggccccaagggagatcctggagaccggggtcccattggcctcacgggcaga gcaggacccccgggtgactcggggcctcctggagagaagggggactctgggcggcctggc ccctctggacctgttggcccccgaggacgagatggtgaagttggagagaaaggtgacgag ggccccccgggtgacccaggtttgcctggaaaagctggcgagcgtggccttcggggggca cctggagctcgggggcctgtaggtgagaagggagaccaaggagatcctggagaggatgga cgaaatggcagccctggaccatctggacccaagggggaccgtggggagccgggtccccca ggactccctggacggctggtggacccgggacttagagctggagagaagggagagcctggg gaccgtggacaggaaggtcctcgaggacccaagggtgacccgggcccccctggagcctct ggggaaaggggtgtcagcggacttcaggggcccgcaggccctcagggggacccaggtgtc cgaggcccagcaggagagaagggtgaccggggtccacctggtctggacggccgtggtggg ctagatgggaaaccaggagccactggcccccctgggctgcatggtgctacaggcaaagct ggagacccagggagagacggcctgccgggcctccgaggagaacatggcccccctggccca cctggcccccctggagcccagggaaagccaggagaggacggcaagcctggcctgaatggg aaaaacggagaacccggggaccctggagaagatggaaggaagggagagaagggagactct ggcgcccctgggagagaaggtcacgatggtcccaagggtgagcgtggagctcctggtagc cctggactccagggccccccaggcctcccagggcaagtgggcccctccggccagggtttt cctggggttccgggaaacatgggccccaagggtgaccgtggggagactggacccaaaggg gaacagggcctccctggagagcgtggcctgagaggagatcctgggagcgtggggaatgtg gagcggttgctggaaactattggcatcaagacgtctgccctgcgggagatcgtggagacc tgggatgagagctccggcagcttcctgcccatgcctgaacgacgccgtggccctaagggg gagccaggcgagcggggccccccgggcaaggagggccgtatcggcttttctggagaacgt gggctgaagggagatcgcggagaccctggccctcaggggccaccaggcctggcccttggg gaaaggggcccccctggacctccgggccttgctggggagcctggaaagcctggcattcct gggctcccaggcccggctgggggcacgggggaggcaggcaggccaggagagaggggagaa cggggagagaaaggagaacgtggagaacagggcagagacggcactcctggcctccctgga cctcccggcccccctggccccaaggtgaccgtggaggaaccaggtcctggactctctgga gtgcaaggaccccctggattcaagggcgcaaagggggagccaggcagtgacggcgaccaa ggccccaagggagacaggggtgtgccaggcctcaagggagaccggggagagcctggccag aggggtctcgatggcagcttgggcctaccaggagagcgtggtgtggcgggacccgaaggg aagccgggtttgcaaggtccgaggggaacccctggcccagtgggtggccatggagaccct gggccacccggtgccccgggtcttgctggccccgcaggaccccagggtccttctggcctg aagggggaacctggagagacgggaccaccgggacggggtctgcctggacccactggagct gtgggacttcctggccctcctgggccttcaggcttggtgggtcctcagggggcgccaggt ttgcctggacaagtgggggagacgggaaagccaggagccccaggtcgtgatggtgccggt ggaaaagatggagacagaggagctcctggcgtgccggggtcaccaggtctgcctggccct gttggacctaaaggagagcctggacccatgggggctcctggacaggctgtagtcgggctc cctggagcaaagggagagaagggagcgcccggaggcctcgcgggagacctggtgggagag ccgggggccaaaggtgaccgaggactgccagggcctcggggtgagaagggtgaagctggc cgtgcaggggagcctggagaccctggggaagatggtcacaaagggactccgggactcaag gggagtaagggtgacgcaggagttggggtccagggcccccctgggccagctggtcctcta ggtctgaagggagatgtgggtccccctggtccccccggtgctcctggtgttgtcggattc cctggtcagacaggccctcgaggagagatgggtcagccaggccccagtggagagcggggt ctggcaggtctcccagggagagagggagccccaggtccctcagggccacctggaccacca gggtcaacgggagtacccggggcctctggactcaaaggagacaagggagaccctggagca ggtctgcctggggcccgtggcgagcgtggggagccaggtgtccggggtgaagatggccgt cccggccaggaaggaccccgaggactcacggggcccccgggcagtcggggggagcgtggg gagaagggtgacaccggagcctcagggctgaagggtgacaagggtgatgcagccatagct gtggggcctccagggccacgcggtgccaagggggacatgggtgaacgagggcctccaggc atagatggtgacaaaggacctcgtggagagagtgggaaccctggagagaagggccccaaa ggagagcctggtgacaagggttcagccgggttgctgggagctcgtggacttacgggaccc aagggtgagcctggtgccgcagggatcccaggtgacccgggattcccaggaaaggacgga gcccctggtgtccgaggagacaaaggagatgttggcttcatgggtccacggggcctcaag ggtgaacgaggggtaaagggagcctgtggcctcgacggagagaagggagataagggagaa gctggtcccccaggccgccctgggctggcaggacgcaagggagatatgggggagccgggg gtgccgggccagtcgggggcccctgggaaggagggcctgatcggtcccaagggtgatcga ggctttgatgggcagccaggatccaagggtgaccagggcgagaaaggggagcgggggctc ccaggaacggggggcttcccaggtcctaggggcagtgatggtgctactggtccccctggg ccacctggcagtgttggtcccaaaggccctgaaggacttcaggggcagaagggtgagcga ggcccccccggagagagagtggtgggtgcccctggagcccctgggacccctggagagaga ggagagcaggggcggccagggcccgccggcccccgtggggagaagggagaagctgcactg acagaggatgacattcgaggttttgtgcgtcaggagatgagtcagcattgcgcctgccag ggccagttcatcgcatctggatcacgacccctccctagttatgctgcagacactgccagc ccccagctccaccctgtgcctgtgctccgggtttctcacgcagaggaggaaggccgggtg cctcctgaggacgacgagtatgaatactctgagtactccgtggaggaataccgggacccc gaagctcctcgggttggcgatgacccctgtttgcttccgctggacgagggcacctgtact gcctacaccctgcgctggtaccatcgggctgcggcaggtggcacagaggcctgtcacccc tttgtctatggcggctgtggagggaatgccaaccgttttgggacccgtgaggcctgtgag cgccgctgcctgcccggcgtggtccagaaccagggaacaggtgctgcccggagctga

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