KEGG   Ailuropoda melanoleuca (giant panda): 100476294Help
Entry
100476294         CDS       T01329                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aml00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    100476294 (LIG4)
Enzymes [BR:aml01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100476294 (LIG4)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100476294 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
UniProt: 
LinkDB All DBs
Position
Un
AA seq 911 aa AA seqDB search
MAASHTSPTVASRVPFADLCSTLERIQRSRERAAKIRHFREFLDSWRRFHDALHKNQRDV
SDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRA
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHRQGDVYQYFSRNGYNYTD
QFGDSPREGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRHEILTSVFTPIPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVSSDMYKAGCTLRFPRIERIREDKEWHECTTVDDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKVCNIFE
DVEFCVMSGTGSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDHYGDSYFIDTDLNQLKEVFSG
IKNSGEQTPGEMASVIAHLEFRYSWDRCPLSMFRQHIIYVDVYAVINDLSTKIEGTRLAV
MGLELRFHGAKVVSRLAQGVSHVIVGEDRSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENRYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggcggcctcacacacttcgccgactgtcgcatctcgcgttccttttgcagacttgtgt
tcgactttagaacgcatacagagaagtagagagcgtgcagcaaaaatcagacacttcagg
gagtttttagattcttggagacgatttcatgatgcccttcataagaaccaaagagatgtc
agcgactccttttatccagcgatgagactcattctccctcagctagagagagagagaatg
gcctacggaatcaaagaaactatgcttgctaaactttatattgagttgcttaatttacct
agaggaggaaaagacgcccttaaacttttaaattacagaacacccactggaactcgtgcg
gatgccggagactttgcaacaattgcgtattttgtgttgaaaccaagatgtttgcagaag
ggaagtttaaccatacaacaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctgataaagaagagtcttcttcagctaataagtcagagttcagcc
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagcgaa
cagtctgtattttctgttttccataatgatgctgctgagttgcataatgtcaccactgat
ctggaaaaagtctgtaggcaactgcatgatccttccataggcctcagtgatatttctatc
actttattctctgcctttaaaccaatgctggctgcaatagcagatattgagcgaatcgag
aaagacatgaaacaccagagtttctacattgaaaccaagctagatggcgagcgtatgcaa
atgcacagacagggggatgtgtatcagtacttctcccggaatggatataactatacggat
cagtttggcgactctccccgggaaggttctcttacaccgttcattcacagtgcattcaaa
acagacgtacaaatctgtatcctggatggcgagatgatggccttcaaccctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgatctg
cagacttgttattgtgtgtttgatgtactgatggttaataataaaaagctaggacgtgag
accctgaaaaagaggcatgaaattcttactagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactcagaaagaagtgattgatgctttgaatgaa
gcaatagataaaagggaagagggaatcatgataaaacaccctctgtctatttacaagcca
gacaaaagaggtgaaggatggctgaagattaaaccagagtacgtggatgggctgatggac
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggggggatgatg
tctcattttttatgtgctgtagcagaaaagcctcctcctggtgaaaaaccatccgtgttt
cacactctgtgccgtgttggttcaggttataccatgaaggaactgtacgatctgggtttg
aaattggccaaacattggaagccttttcataaaaaagctccacccagcagcattttatgt
ggcacagagaagccagaagtatacatcgagccttgccattctgtcattgttcaagtgaag
gcgacagagatcgtctccagtgatatgtataaagctggctgcacgttgcgttttccacgg
attgaaaggataagagaagacaaagagtggcacgaatgcaccaccgtggatgacttagag
caacttcgcgggaaagcgtcgggaaagcttgcgtccaaacacctgtacgtaggtgacgat
gatgagccgcaagaaaagaagcggaaagctgccccgaaggtgaagaaagttattgggatt
atcgagcacttaaaagcacccaacctttctaacgtaaacaaagtttgtaatatattcgaa
gatgtggagttctgtgtcatgagcggaacgggcagccatccaaagcctgatctggagaac
aggatcgcagaatttggaggttatatcgtccaaaatccaggcccagacacatactgcgtg
atcgcagggtctgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgctagagtgttttaagaccaaaagctgtgtgccgtggcagcct
cgctttatgattcatatgtgcccatcgacaaaggaacattttgcccgtgaatacgatcat
tatggcgacagttattttattgatacagatttgaaccaactgaaggaagtgttctcaggc
attaaaaattccggcgaacagactcctggagaaatggcttctgtgattgcccatttagag
tttcggtattcctgggaccgctgccctctcagtatgttccgacagcacattatttatgtg
gacgtgtatgctgtcattaatgacttgagcaccaaaatcgaggggacgagattagctgtc
atgggtttggaacttcgatttcatggagccaaggtagtttcccgtttagctcagggagtg
tctcacgtaatcgtcggggaggaccggagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtcactgattccatagacaag
tgtgagttgcaggaggaaaatcgatatttggtttaa

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