Ailuropoda melanoleuca (giant panda): 100478319
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Entry
100478319 CDS
T01329
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100478319 (TMC6)
03037 Cilium and associated proteins [BR:
aml03037
]
100478319 (TMC6)
Transporters [BR:
aml02000
]
Other transporters
Pores ion channels [TC:
1
]
100478319 (TMC6)
Cilium and associated proteins [BR:
aml03037
]
Other cilia and associated proteins
Stereociliary proteins
100478319 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
100478319
NCBI-ProteinID:
XP_034496867
Ensembl:
ENSAMEG00000013773
LinkDB
All DBs
Position
13:complement(41916262..41933828)
Genome browser
AA seq
882 aa
AA seq
DB search
MLGSGWGAGRGSVGLGCGHLPRSPGSGWFGWAPGSEGQPWCATPCLLRWAAGGFGGCAQA
LSCPRPRTGWAWVTDMAQPLNFVLNVPETPEDHGQEPSPYDESEVHDSFHQLIEEQSRWV
AEEGLELQQREPGAGAGASETSGTGHQALLGPEDALVHSTATLRILASMPSRTIGRSRGA
ILSQYYNRTVRLRRRVSRPEVRGVGRSARPSLRLYDLELDPAALEEEEKRFLLVKELQGL
TVAQQDHMLRGMPLGLAEKRCLREESRTLTGKRRGRQGRRGLPPCCGQLRDACVLALHSL
GLWLLSGLPALMPWRYALKRIGGQFGSSVLSYFLFLKTLLAFNLLLLLPLLAFIVGVQAA
FPPASPGSVPTFTGLELLTGGGRFTHTVMYYGYYSNSTLNQPCAPPLDGGQCSREADSLP
YNMPLAYLFTVGVAFFITCITLVYSMSRSFGESFRVGSASGVHAVTVFCSWDHKVTQRRA
SRLQHDSIRTHLKELLADWQLRQGSRSACGRLRQVAVLGLVWLLCVGTTLGCTVAVYAFS
ELMIKSPASAEQEGALLALPVVVCLLNLGAPYLYRGLAALERHDSPVLEVYVAICRNLIL
KMAILGILCYHWLGRRVGALKDQCWENFVGQELYRLMVLDFIFVLLDTLFGELLWRLISE
KKLKRREKPEFDIAGNVLELIYGQTLTWLGVLFAPLLPAVQLSKLLLVFHLKKTSLMANC
RAPRRPWLASHMSTVFISLLCFPSFLGAAVFLCYAVWQVKPSSVCGPFRTLDTMYEAGKV
WVRRLEKAGPRLSWVPWVHRYLVENTFPVYLVSALLLAVIYLNVQVVKGQRRVIALLKEQ
ISNEGEDKIFLINKLHSVYERKERRVGRAQEAERLEDDPDTW
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcagtggatggggggcaggcaggggctcagttggcctgggctgtgggcacctc
ccacggtccccggggagtgggtggtttggctgggcaccaggctctgaaggccaaccttgg
tgcgccactccctgtctcctcagatgggcagcgggaggctttggaggctgtgcccaggct
ctgagctgccctagaccgcggactggctgggcgtgggtcacagacatggcccagcccctg
aactttgtcctcaatgttcccgagaccccagaggaccacggccaggagcccagcccctat
gatgagagcgaggtgcacgactccttccaccagctcatcgaggagcagagccggtgggtg
gcggaggaggggctggagctgcagcagagagagcccggggctggggctggagcctcggag
acctcaggcactggccaccaggccctgctggggcccgaggacgcccttgtccacagcaca
gccacactccgcatcttggccagcatgcccagtcgcactattggccgcagccgcggggcc
atcctctcccagtactacaaccgcacggtgcggcttcggcgcagggtcagccggcccgag
gtcaggggcgtggggcgctcggcccggcccagcctccgcctctacgacctggagctggac
cccgcggccctcgaggaggaggagaagcggtttctcctggtgaaggagctgcagggcctg
acggtggcccagcaggaccacatgctccgggggatgcccttgggcctggctgagaaacgc
tgcctgcgagaggagagccggaccctgacggggaagcggaggggccgacagggccggcgg
gggctccccccctgctgtggccagctccgagatgcctgcgtcctggccctgcacagcctg
gggctctggctgctctcgggcctgcccgccctgatgccgtggcgctacgccctgaagcgc
atcggaggccagttcggctccagcgtgctgtcctacttcctcttcctcaagaccctgctg
gccttcaacttgctcctgctgctgccgctgctggccttcatcgtgggcgtgcaggcggcc
ttcccgccggcctccccgggctccgtccccacctttacgggcctggagctgctcacgggc
gggggccgcttcacccacaccgtcatgtactacggctactacagtaacagcaccctgaac
cagccgtgtgcgcccccgctggatggtggtcagtgcagccgcgaggccgacagcctgccc
tacaacatgcccttggcctacctcttcacggtgggcgtagcctttttcatcacctgcatc
accctggtgtacagcatgtcccgctctttcggggagagcttccgggtgggcagtgcctcg
ggggttcatgccgtcaccgttttctgctcctgggaccacaaggtgactcagagacgggcc
tcccgcctccagcatgacagcatccgaactcatctgaaggagctgctggcggactggcag
ctacggcagggctcccggagcgcgtgcgggcggctgcggcaggtggcggtgctggggctc
gtgtggctgctctgtgtggggaccacgctgggctgcactgtggccgtctacgccttctcc
gagctcatgattaagagccccgcgtccgctgagcaggagggggcgctgctggccctgccc
gtggtggtctgcctcctcaacctgggggccccctacctgtaccgcggcctggccgccctg
gagcggcacgattccccggtgctggaggtatacgtggccatctgcaggaacctcatcctc
aagatggccatcttgggcattctgtgctaccactggctgggccgcagggtgggcgccctg
aaggaccagtgctgggagaactttgtgggccaggagctctatcggctcatggtgctggat
ttcatcttcgtgctgctggacacgctgttcggggagctgctgtggaggctcatctctgag
aagaagcttaagaggagggagaagccggagttcgacattgccggcaacgttctggagctg
atttacgggcagaccctgacctggctgggggtcctcttcgcccctctgctccctgccgtc
cagctcagcaagctgctgcttgtcttccacctcaagaagaccagcctgatggccaactgc
cgggcgccccgcagaccctggctggcttcccacatgagcaccgtcttcatctcgctgctc
tgcttcccctccttcctgggagccgccgtcttcctctgctacgcggtgtggcaggtgaag
ccctcgagcgtctgcggccccttccgcaccctggacaccatgtacgaggccggcaaggtg
tgggtgcgccgtctggagaaggcgggcccccggctgtcctgggtgccctgggtgcaccgg
tacctggtggagaataccttccccgtctacttggtgtcggccctgctgctggcggtgatc
taccttaatgtccaggtggtgaagggccagcgccgggtcatcgctctcctcaaggaacag
atcagcaacgagggggaagacaaaatcttcttgatcaacaaacttcactccgtctacgag
aggaaggagaggagggttggtagagcccaggaggcagagaggctcgaggacgatccggac
acctggtag
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