Ailuropoda melanoleuca (giant panda): 100478541
Help
Entry
100478541 CDS
T01329
Symbol
SETD1B
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml00310
Lysine degradation
aml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100478541 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478541 (SETD1B)
Enzymes [BR:
aml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100478541 (SETD1B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100478541 (SETD1B)
HMT complexes
COMPASS/SET1 complex
100478541 (SETD1B)
COMPASS/SET1 complex (yeast)
100478541 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100478541
NCBI-ProteinID:
XP_034493844
LinkDB
All DBs
Position
12:complement(7025062..7048214)
Genome browser
AA seq
1999 aa
AA seq
DB search
MENSHPPPHHHQKKKKKKKPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLA
VSRRRASQKNAPPSRPHPPPAEPGAGGKRSERPRRACEWGMLCFPWFQCPPNSLPPRPCQ
IDEFYVGPVPPKQVTFAKLNDNIRENFLRDMCKKYGEVEEVEILYNPKTKKHLGIAKVVF
ATVRGAKEAVQHLHSTSVMGNIIHVELDTKGETRMRFYELLVTGRYTPQTLPVGELDAVS
PIVNETLQLSDALKRLKDGSLSAGCGSGSSSVTPTSGGTPFSQDTAYSSCRLDTPNSYGQ
GTPLTPRLGTPFSQDSSYSSRQPTPSYLFSQDPTVTFKARRHESKFTDAYNRRHEHHYVH
NSCAVAAVAGAPAAFRSSMDLPFGAVSSSGGNSGPPFKAQPQDSATFAHTPPPAQATPTP
GVTFKSTFSPYQTPVPPFPPPPEEPATTTTFGARDSGEFRRAPVPPPLPPTEPLTKEKPG
TPPGPPPPDANSMELGGRPTFGWSPEPCDSPGTPTLESSPAGLEKPHDSLDSRIEMLLKE
QRTKLPFLREQDSDTELQMEGSPISSSSSQLSPLAPFGTNSQPGFRGPTPPSSRPSSTGL
EDISPTPLPDSDEDDELDLGLGPRPPPEPGPPDPSGLLGQTTEVALDLAGDRTPTSEKMD
EGQQSSGEDMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPT
TAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVPPPPLPAPPPGVPPPPILPPLPPFP
PGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQMLSRLMTGQGACPYPPFMAAAAAAASAGL
QFVNLPPYRGPFSLSNSGPGRGQPWPPLPKFDPSVPPPGYVPRQEDPHKATVDGVLLVVL
KELKAIMKRDLNRKMVEVVAFRAFDEWWDKKERMAKASLTPVKSGEHKDEDRPKPKDRIA
SCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSFKVKRKEPPDTASSGDQKRLRPSTSVDE
EDEESERERDRDMADAPCELTKRDPKGVGVRRRPARPLELDSGGEEDEKESLSVSSSSSA
SSSSGSSTTSPSSSASDKEERESTEEEEDGEEEEEEEEDDDEEEEEGPRSQVSSSSTSSM
SDKDDDDEDSDDQDESENDDEDVALSEASEKEEGDSDGEETVSIATSKAGAGSSSESSES
SEFESSSESSSSSSEDEEELVAREEEEEEEEEEAAADESVVPAVPDEDFEEDVATGAPVM
ESSVMEEEVDIEAEDEAPEERTPMLEEPPLPVCVEELASCKEPPEEQDLKQEGARLLSPE
PPAGEMEARPPASPERTPEDDLEVEPPTLLSLPLQPPQPPPQPPRPPSPPPEPETPDPPH
PPVPLEPPPEEQPPRTPGLCGSLAKSQSTETVPATPSGEPPLSGGSSGLSLSSPQVPGSP
FSYPSQSPSLSSGGLPRTPGRDFSFTPTFPEPGGPLLLPVCPLPAGRRDERSGPLASPVL
LETGLPLPLPLPLPLPLALPVPVLRAQTRAPAQLPPLLPAPLAPCPPPIKRKPGRPRRSP
PAVLSLDGPLVRPPAGATLGRDLLLLPGQPQTPVFPSTHDPRAVTLDFRNAGIPAPPPPL
PPQPPPPPPPPPVESTKLPFKELENQWPSEAIPPGPRGRDEVTEEFMDLAKVRGHWRRPP
KKRHEDLVAPASPELSPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQ
DNGMDWLNDTLWVYHPSTSLSSAKKKKRDDGIREHVTGCARSEGFYTIDKKDKLRYLNSS
RASTDEPPTDTQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKK
KLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVD
HDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPI
EDVKIPCLCGSENCRGTLN
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtcacccccccccccaccaccaccaaaaaaaaaaaaaaaaaaaaaaaccc
ggcccttctggagagaggaggaaccaccattggagaagttacaagttgatgattgacccg
gctctgaaaaaggggcatcataaactgtaccgctacgatgggcagcatttcagcctggcg
gtaagtagacggcgcgcctcccaaaaaaacgccccccccagccgcccccacccaccccca
gccgagccgggggcgggaggaaaaaggtccgagcggcccaggcgggcatgcgagtgggga
atgttgtgttttccttggtttcaatgtcctccaaactcccttccccctcgtccctgccag
atcgatgagttctacgtgggcccggtgcctccgaaacaggtgacatttgccaagctgaat
gataacatccgagaaaacttcctgagggacatgtgtaagaagtatggcgaggtggaggag
gtggaaattttgtacaaccctaagaccaagaagcacttgggcattgccaaggtggtcttt
gccacggtcaggggagccaaggaggctgttcagcacctgcacagcacctcagtcatgggc
aatatcatccacgtggagctggacactaaaggggaaacccgcatgcggttctacgaactg
ttggtcacgggccgatacacaccccagaccctcccagtgggcgagctggatgctgtctct
ccaattgtgaacgagaccctgcagctgtcagatgctctgaagcgcctcaaggatggtagc
ctgtctgcaggctgtgggtctggctcctcttctgtcacccccactagtggcgggacaccc
ttctcccaggacactgcatactccagctgccgcctggacacacccaactcctacggacag
ggcacaccgctcacgccgcgcctgggcacccccttctcgcaggactccagctactccagc
cgccagcccacaccctcctacctcttcagccaggaccccacagtgaccttcaaggcccgg
cgtcatgaaagcaagttcacagatgcctacaaccgccgtcatgagcatcattatgtccac
aactcttgtgcggtcgctgcagtggcaggggccccagctgccttcaggagctccatggac
ctcccatttggggcagtcagcagcagtgggggcaacagtggccctccgttcaaggcccaa
ccacaggattcggccacgttcgcccacactccaccacctgcccaagcaacccccactccc
ggagtcacattcaagtcgactttctctccgtatcagactcctgtgccccctttcccccca
ccccccgaggagcccgccaccacaaccacctttggggcccgtgacagcggggaattccgg
agagcacctgtgcccccacccctgccacccactgagcccctgaccaaggagaagccaggc
acacctcctggcccaccacctcccgacgccaacagcatggagttgggtggccggccgacc
tttggctggagtcctgagccctgcgacagtccaggcacgcctacgctggagtcatcacct
gcggggctggagaagccccacgacagcttggactcacgcatagagatgctgctgaaggaa
cagcgcaccaagctgcctttccttcgggagcaggattcggatacggagctgcagatggag
ggcagccctatctcctcttcctcctcccagctctccccactggccccctttggtaccaac
tcccagccaggctttcgaggccccacaccaccctcctcacgcccctccagcactggcctg
gaggatatcagtcccacgccactgcctgactcagacgaggatgatgagcttgacctgggc
ttggggccccggccccctccggagccaggccctccggacccttctggtcttctgggccag
acaactgaggtagccttggacctggctggagacaggaccccaacctcagagaagatggat
gagggccagcagtcctcgggcgaggacatggagatctcggatgatgagatgccctcagcc
cccatcaccagcgccgactgccccaaacccatggtggtgaccccaggggcggcggctgta
gcagccccctctgtgctggctccgaccctgccgctgcccccaccccccggcttcccaacc
actgcccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtgacagtgcccccaccacccctg
ccagcgcccccacctggcgtcccacccccgcccatcctgccaccgctgccacccttccct
ccagggctgtttcctgtgatgcaggtggatatgagccacgtgctgggtggccagtggggc
ggcatgcccatgtccttccagatgcaaacgcagatgctgagccgtctgatgactggccag
ggcgcttgcccgtacccacccttcatggccgcggctgcggcggcggcctcagctgggctg
cagtttgtcaacctgccgccctaccggggcccgttctccctgagcaacagcggaccaggc
cgcgggcagccctggccacccctccccaagtttgacccatcagtgccgccaccaggctat
gtgccacgccaggaggacccacacaaggccactgtcgatggcgtcctgctggtggtgctc
aaagagctcaaggccatcatgaagcgcgacctgaaccgcaagatggtggaggtggtggcc
ttccgggccttcgatgagtggtgggacaagaaggagcggatggccaaggcctcactgacc
ccagtgaagtcaggcgagcacaaggacgaggacaggccaaagcccaaggaccgcatagcc
tcgtgcctgctggaatcgtggggcaagggtgagggcctgggctatgagggcctcggcctg
ggcatcgggctgcgcggggccatccgcctgccctccttcaaggtaaagaggaaggagccg
ccagacacagcctcttctggtgaccagaagcgcctgcggccttcaacctctgtggatgag
gaagatgaagagtcagagcgtgaacgggaccgggacatggcggatgccccttgcgagctc
accaagcgggaccccaagggtgtgggcgtgcggcgacggccagcccggccgctggagctg
gacagtgggggggaggaggacgagaaggagtcactgtcagtgtcctcatcatcatcggcg
tcctcatcctcgggctcctccacaacctcaccctcatcctcggcctccgacaaggaggag
cgggaaagcactgaagaggaagaggacggagaggaggaagaggaggaggaagaggatgac
gacgaggaggaggaggaaggccccaggagccaggtctcctcctcctcgacctcatccatg
tcagataaggatgatgacgatgaagacagtgatgaccaggatgagtctgagaatgacgac
gaggacgtagccctgtcggaggcgagtgagaaggaagaaggggactcggatggagaggag
acagtgagcatcgccacctccaaggctggagccgggtcctccagcgagagttctgagtct
tctgagttcgagtcaagctcggagtcctcgtcatcgtcctcagaggatgaagaggagctg
gtggcaagggaggaagaggaggaggaggaggaggaagaggcagcagcagatgaaagtgtg
gttcctgcggttcccgacgaggactttgaggaggatgtggccacaggggcacctgtgatg
gagtcctcggtcatggaagaggaggtggacatcgaggctgaggatgaagcccccgaggag
cggacccctatgctggaagagccccccttgcctgtgtgtgtcgaggagctggctagctgc
aaggagccccctgaggagcaggacctgaagcaggaaggggccaggttgctgtctccagag
ccccctgctggagagatggaggcccggcccccggcttccccagagcgcaccccagaggat
gacctggaagtggagccccctacactgctctccttacccctgcagccgccacaaccaccc
cctcaaccgccccggccgcctagcccaccaccagagcctgagaccccagaccccccacac
ccacccgtccctctggagccccctccagaggagcagcccccacgtactccgggcctctgt
ggcagcttggccaagtcacagagtacagagacggtgccggccacgccgagcggggagccc
ccattgtcggggggcagcagcggcctgtcactgagctccccacaggtgcccggcagtccc
ttttcctacccatcccagtcccccagcttgagcagtgggggcctccccaggacacctggt
cgggacttcagcttcacacccaccttccctgagcctggcgggcccctgctcctgcctgtc
tgtcccctcccagctggccggcgcgatgagcggtctggccccctggcctccccggtgctc
ctggagacgggcctgcctctccccctgcccttgcccctgcccctgcccctggcattacct
gtccccgtcctgcgggcccagacacgggcccctgcccagctgccacctctgttgcccgcg
ccactggccccctgcccaccccctatcaagaggaagccgggcaggccccggcgatctccg
ccggctgtgctctccttggatgggcccttggtccggccaccagcgggggccaccctcggc
agggaccttctgctcctgccaggccagccacagacccctgtctttcccagcacccatgac
ccccgggccgtgaccctggacttccggaatgcgggaatcccagcccccccaccacccctg
cctccgcagcctcctccgcccccaccgccaccccctgttgagtccaccaaactgcccttt
aaggagctagagaaccagtggccctccgaggccatccctccaggccctcgcgggcgtgat
gaggtcactgaggagttcatggacctggccaaggttcgggggcactggcgccggccacct
aagaagcgccacgaggacctggtggccccagcctcgcctgagctctcgccaccacaaccc
ctcttccggccccggtctgagttcgaggagatgaccatcctgtatgacatctggaatggt
ggcatcgatgaggaggacatccgcttcctgtgtgtcacctacgagcggctgctgcagcag
gacaacggcatggactggctcaatgacacactctgggtctaccatccctccaccagcctc
tcttcagctaagaaaaagaaacgggacgatggcatccgtgagcacgtgacgggctgtgcc
cgcagcgagggcttctataccatcgacaagaaggacaagctcagatacctcaacagtagc
cgcgccagcaccgatgagcccccgacagacacccagggcatgagcatcccggcgcagcct
catgcctccactcgggcgggctcggagcggcgttctgagcagcgccgtctgctgtcctcc
ttcactggcagctgtgacagtgacctgctcaagttcaaccagctcaagttccggaagaag
aagctcaaattctgcaagagccacattcacgactggggcctgttcgccatggaacccatc
gcggctgacgagatggtcattgagtacgtgggtcagaacatccgccaggtgatcgcggac
atgcgggaaaagcgttacgaggacgagggcattggcagcagctacatgttccgggtggac
cacgacaccatcatcgatgccaccaagtgcggcaactttgcacgcttcatcaaccacagc
tgcaaccccaactgctatgccaaggtgatcacggtggagtcgcagaagaagattgtcatc
tactcgaagcagcacatcaacgtcaacgaggagatcacctacgactacaagttccccatc
gaggacgtcaagatcccctgcctgtgcggctctgagaactgccgggggaccctcaactag
DBGET
integrated database retrieval system
