Ailuropoda melanoleuca (giant panda): 100478725
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Entry
100478725 CDS
T01329
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04613
Neutrophil extracellular trap formation
aml05014
Amyotrophic lateral sclerosis
aml05034
Alcoholism
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100478725 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100478725 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100478725 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100478725 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aml01009
]
100478725 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100478725 (HDAC6)
04131 Membrane trafficking [BR:
aml04131
]
100478725 (HDAC6)
03036 Chromosome and associated proteins [BR:
aml03036
]
100478725 (HDAC6)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100478725 (HDAC6)
Protein phosphatases and associated proteins [BR:
aml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100478725 (HDAC6)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100478725 (HDAC6)
Membrane trafficking [BR:
aml04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100478725 (HDAC6)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100478725 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100478725
NCBI-ProteinID:
XP_019653638
Ensembl:
ENSAMEG00000012489
UniProt:
G1M1M5
LinkDB
All DBs
Position
X:41359452..41379605
Genome browser
AA seq
1203 aa
AA seq
DB search
MEKRASSGTRRPAGRQEFGGVSPGRSVRKGLRPNRVRGEVSPTMTSTGQDSTTTRQRRSR
HNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLSQAAEQDLIVGLQGLDLN
LEAKTLSGTGLVFDEQLNEFHCLWDDSFPECPERLHAIKQQLIQEGLVDRCVSFQARFAE
KEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDA
VLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHAIQRVLIVDWDVHHG
QGTQFAFDRDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRGQGYTINVPWNQVGMRDA
DYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGK
LILSLEGGYNFRSLAEGVSASLHTLLGDPCPILESPGAPCWSAQASLSCALEALEPFWEV
LVRSAETLDEDFLEEENVEKEEEGPWQPPALPVLTWPVLQARTGLVYDQRMMGHYNLWDN
HHPEMPQRVFRIMRRLEELGLAGRCLTLPARPATDSELLTCHSAEYVGRLRATAKMKTRE
LHREGSNFDSIYICPGTFACAQLATGATCRLVEAVLAGEVLNGAAVVRPPGHHAERDAAC
GFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGT
FFPMGDEGASSQMGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLARPPLSGALASITETIQVHRRYWRSLRVMKVEDKEGPSSSKSITRKVTLP
AHRGPAVQMTAPDRNILDADIGKATSASSVEVSTPDQAKSETAVVALNQDQASEAPTREA
MLDQTPSEAATEGATLDQTIVGTATVGATPGQTTSEEAVREAEVIQTPPALRTDSQTPPA
SPVQGATAQISPSKLTESLRTLDLNSEAQKAPESQSPEEERLLGEAAEGQDRDHSMLIQS
FGDHADGDQVTFYAVIPLPWCPHLVAVGPIPESGLDVTQPCQDCGTLQENWVCLSCYQVY
CGRYVSAHMLQHHGVSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKSIAHQNKFGEDMP
HSH
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagggcctcctcaggcacccgccgtcccgcgggtcgccaggaatttggcggc
gtgagccctgggcggagtgtgagaaaagggctgcgcccaaaccgcgtcaggggtgaagtc
tccccgaccatgacctccaccggccaggattccaccacaaccaggcagcgaaggagtagg
cataacccccattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaag
ggtgccttactccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaag
aagctcagccaagcagcagagcaagacctcatcgtgggcctgcaaggactggatctgaac
cttgaggccaagacactgtctgggactggtttagtgttcgatgagcagctaaatgaattc
cactgcctctgggatgacagcttccctgaatgccctgagcggctccatgccatcaagcaa
cagctgatccaggagggccttgtggaccgctgcgtgtccttccaggctcgctttgctgaa
aaggaggagctgatgttggttcacagcctagaatacattgacctgatggagacgacccag
tacatgaatgagggagagctccgcatcctagcagacacctatgactcagtgtacctgcat
ccgaactcatatacctgtgcctgcctggcctcgggctctgtcctcaggctggtggatgcg
gtcctggggaatgagatccggaatggcatggccatcatcaggcctcctggacaccacgcc
cagcacagtcttatggatggatattgcatgttcaaccacgtggccgtggccgcccgctat
gctcaaaagaagcatgccattcagagggtccttattgtggattgggatgtgcaccatggt
caaggaacacagtttgcctttgaccgggaccccagtgtcctctatttctccatccaccgc
tacgagcagggtaggttctggccccacctgaaggcctctaactggtccaccgtaggtttt
ggccgaggccagggatataccatcaatgtgccttggaaccaggtggggatgcgcgatgcc
gactacattgccgctttcctgcacctccttctgccagtcgcccttgagttccagccccag
ctggtcctggtggccgctggatttgacgccctccaaggggaccccaagggtgagatggcc
gccactccggcaggattcgctcagctaacgcacctgctcatgggtctggcaggaggcaag
ctgatcctgtctctggagggtggctacaacttccgctccctggctgagggcgtcagtgcc
tcactccacacccttctgggagacccttgccccatactggagtctcctggtgccccgtgc
tggagtgcccaggcatcactgtcctgtgctctggaagccctggagcccttctgggaggtc
cttgtaagatcagctgagaccctggatgaggacttcttggaggaggagaacgtggagaag
gaagaagaaggaccgtggcagcccccggcgctcccagtcctgacgtggcccgtgctacag
gctcgcacagggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaac
caccacccagagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactaggc
cttgcagggcgctgcctcaccttgcccgcacgtcccgccacggactccgaactgctcacc
tgccacagtgctgagtacgtgggtcgtctgcgggccacagcgaagatgaaaacgcgcgag
ctgcaccgcgagggctccaactttgactccatctacatctgtcccggcacctttgcctgt
gcccagctggccactggcgccacctgccgcctggtggaggccgtgctggccggagaggtt
ttgaatggcgccgctgtggtgcgtcccccaggacaccacgcggagcgggatgccgcgtgc
gggttttgctttttcaactctgtggctgtggctgctcgccatgcccaagccatcagtggg
catgcgctgcggatcctcatagtggactgggacgtccatcacggtaatggaactcagcac
atatttgaggaagaccccagcgtgctgtacatctccctgcaccgatatgatcacggcacc
ttctttcccatgggggatgagggcgccagcagccagatgggccgggccgcaggcaccggc
ttcactgtcaatgtggcctggaacgggccccgcgtgggtgacgctgactacctggctgcc
tggcaccgtctggtgctccccattgcctacgagtttaacccagaactggtgctggtctcg
gctggctttgacgccgcacggggggacccgctggggggctgccaggtgtcacccgagggc
tatgcccacctcacccacctgctgatgggccttgccaatggccgcatcatcctaatccta
gagggtggctacaacctgacctccatctcggagtccatggctgcctgcacccgttccctc
cttggggacccaccaccactgctaaccctggcgcggcccccgctgtcaggggccctggcc
tccatcaccgagaccatccaagtccatcgcagatactggcgcagcttgcgggtcatgaag
gtcgaagacaaggagggaccttccagttctaagtcaatcaccaggaaggtgaccctgcca
gcccaccgtgggccagctgtgcagatgaccgcaccagacaggaacattctagatgcggac
atagggaaggctacctcagcatcatccgtggaagtgtccaccccagaccaagctaagtca
gagactgctgtggtggcactcaatcaggaccaagcctcggaggctcccaccagggaagcc
atgctggaccagaccccctcagaggcagccacagaaggagccacgctggaccagaccatc
gtggggacggccacagttggagccacgccaggccagaccacctcagaggaagctgtcagg
gaagctgaggtgatccagacccctccagccttacgtactgacagccagactcccccagcc
tcacctgtgcaaggagccacagcccagatatctcccagtaagctgactgagagtctcagg
accttggacctgaacagcgaggctcagaaggcaccagaatctcagagcccagaagaggag
aggctgctaggagaggcagctgaaggtcaggacagggatcattccatgctgattcagagc
tttggggaccatgccgatggtgaccaggtcacgttttatgcggtgataccactgccctgg
tgtccccatttggtggcagtaggtcccatacctgaatcgggcctggatgtgacccaacct
tgtcaggactgtggaacactccaggagaactgggtgtgtctgtcctgctatcaggtctac
tgcggccgttacgtcagtgcgcatatgctgcagcaccacggggtctcaggacacccgctg
gtcctcagctacgtcgacctgtctacctggtgttacaactgtgaggcctatgtccaccac
caggctctcctggatgtgaagagcatcgctcaccagaacaagtttggggaggacatgccc
cactcacactaa
DBGET
integrated database retrieval system
