Ailuropoda melanoleuca (giant panda): 100478809
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Entry
100478809 CDS
T01329
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100478809 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aml03400
]
100478809 (TDG)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
100478809 (TDG)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100478809 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
100478809
NCBI-ProteinID:
XP_011218350
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All DBs
Position
15:72764942..72787648
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AA seq
401 aa
AA seq
DB search
MEAENAGSCSLQQAQAFYTFPFQQMMADAPAVVVPSEQPVPAEGADPAPAQEPVQETPRG
RKRKLRATEPKKPVEPKKPAEAKKSGKSTKAKEKQEKITDAFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYAENPCSFSSTGLTD
SGESAFVDIPNGQWMTQSFTDQIPSFNNHCGTQEQEEGHHA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcgggcagctgttcccttcagcaagctcaagctttttatacattc
ccgtttcaacaaatgatggcggacgctcccgcggtggtagtgccgagcgagcagccagtg
ccggcagaaggtgcagacccagctcctgcccaggaacctgtacaagagactccaagagga
aggaaaagaaaactgagagcaacagaaccaaaaaaaccagtggaacccaaaaagcctgct
gaggccaaaaaatctggcaagtccacaaaagcaaaagaaaagcaagaaaaaattacagat
gcatttaaagtgaaaagaaaggtagaccgttttaatggtgtttcagaagctgaacttcta
accaagaccctcccggacattttgaccttcaatctggacattgtgattattggtataaac
ccaggactaatggcagcttacaaagggcatcattaccctggacctggaaaccacttttgg
aagtgtctgtttatgtcaggcctgagtgaggtccagctgaaccatatggatgatcacact
ttaccagggaagtatggtattggatttaccaatatggtggaaaggacaactccaggcagc
aaagatctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagttaaggttaaaaacttagagtttggacttcaaccccataagatccca
gacacagaaactctctgctacgttatgccatcatccagtgcgagatgtgctcagtttcct
cgagcccaggacaaagttcattactacattaagctgaaagacttgagagatcagttgaaa
ggcattgaacgaaacacagacgtccaagaggtgcaatatacgtttgatctgcagttggcc
caagaggatgcaaagaagatggctgttaaggaagaaaagtacgacccaggttacgaagca
gcgtacggcggtgcttatgcagagaacccgtgcagcttctcttccacggggctaactgac
agcggagaatcagctttcgttgacattccaaacgggcagtggatgacccagtcgtttaca
gaccagattccttcctttaataatcattgtgggacgcaagaacaggaagaaggacaccac
gcttaa
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