Ailuropoda melanoleuca (giant panda): 100478997
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Entry
100478997 CDS
T01329
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100478997 (MSX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100478997 (MSX1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100478997 (MSX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100478997
NCBI-ProteinID:
XP_034528028
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All DBs
Position
11:104695213..104699498
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AA seq
411 aa
AA seq
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MACAGPSPSRADWPPPRRPRLISKFSGELRPDPEPASAPGNSACAAAPAKNQAPSAGAGL
LGRGEARARGPARPGPRALAKAGRAPSPPEAHARRLARAAAGGGARLCMAPAADMTSLPL
GVKVEDSAFGKPAGGGGGQAPSTTAATAAAMGADEEGAKPKVSPSLLPFSVEALMADHRK
PGAKESALVASEGAQAAGGSAQPLGARPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALV
KAESPEKPERTPWMQNPRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTAQLLALERKFR
QKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAAFG
LSFPLGGPAAVAAAAGASLYGASGPFQRAALPVAPVGLYTAHVGYSMYHLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgccgggccctccccctcgcgtgctgattggccgccgccgcgccggcctcgc
cttattagcaagttctctggggagctgcggcccgacccggagccggcgagtgcgcccggg
aactcggcctgcgcggcggcgccagcgaagaaccaggccccgagcgccggagctggcctt
ctggggaggggcgaggcgcgcgcgcgagggcccgcccggccagggccccgggcgctcgca
aaggccggccgcgctcccagcccgcccgaagcccatgcccggcggctggcccgtgctgcg
gctggagggggggcccggctctgcatggccccggctgctgacatgacttctttgccgctc
ggtgtcaaagtggaggactccgccttcggcaagccggcggggggaggcgggggccaggcc
cccagcaccaccgcggccacggcggccgccatgggcgcagacgaggagggggccaagccc
aaagtgtccccttcactcctgcccttcagcgtggaggcgctcatggccgaccacaggaag
cccggggccaaggagagcgccctggtggcctctgagggcgcccaggcggcgggcggctct
gcgcagcccctgggcgcccggccggggtcgctgggagccccggacgcgccgtcttcgcca
cggccgctgggccatttctcggtgggaggactcctcaagctgccagaagatgcgctggtc
aaagccgagagccccgagaagcccgagaggaccccgtggatgcagaacccccgcttctcc
ccgcccccggccaggcggctgagccccccggcctgtaccctgcgcaagcacaaaaccaac
cgcaagccgcggacacccttcaccaccgcgcagctgctggcgctggagcgcaagttccgc
cagaagcagtacctgtccattgccgagcgcgccgagttctccagctcgctcagcctcacc
gagacgcaggtgaagatctggttccagaaccgccgcgccaaggccaagagactgcaggag
gcagagctggaaaagctgaagatggccgccaagcccatgctgcccccggctgcctttggc
ctctccttcccgctcggcggccccgcggcggtagcggccgcggccggcgcctcgctctac
ggggcctcgggccccttccagcgcgccgcgctgccggtggcgcccgtgggactctacaca
gcccatgtgggctacagcatgtaccacctgacatag
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