Amycolatopsis mediterranei S699: AMES_5834
Help
Entry
AMES_5834 CDS
T02190
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm00250
Alanine, aspartate and glutamate metabolism
amm00310
Lysine degradation
amm00350
Tyrosine metabolism
amm00650
Butanoate metabolism
amm00760
Nicotinate and nicotinamide metabolism
amm01100
Metabolic pathways
amm01120
Microbial metabolism in diverse environments
Module
amm_M00027
GABA (gamma-Aminobutyrate) shunt
amm_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AMES_5834 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AMES_5834 (gabD)
00310 Lysine degradation
AMES_5834 (gabD)
00350 Tyrosine metabolism
AMES_5834 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AMES_5834 (gabD)
Enzymes [BR:
amm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AMES_5834 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AMES_5834 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AMES_5834 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFO79370
LinkDB
All DBs
Position
complement(6569777..6571138)
Genome browser
AA seq
453 aa
AA seq
DB search
MYTVINPATGELVDEIPNAADEEVRDAIDRVHRGYAAWRARPVAERAAIVRRAGELFAER
ADELAAIMTLEMGKRINEGRGELGVVADIFRYYGERGPDLLADEPLAIRGGEAVLTKEPI
GALLGVMPWNFPCYQVARFVAPNLVLGNTILLKHASICPRSAVAIEAVLRDAGVPADAYV
NVFASSRQVPWMLADPRLAGVSLTGSEQAGISVAAEAGRNLKKCVLELGGSDPLIVLDTD
DLDETVKITATARMRNCGQSCNAPKRIIVLGGWYEEFTDRFAKRVTEYYVPGDPADPSTT
LPPLASSAAADEVSAQIETAIREGATLRAGGHRIPGPGAYVEATVLTEVTPEMAAYHEEI
FGPVALLFRAETEEEAVALANDTPFGLGASVFAADRTRAARVARRIEAGMVYVNKSGGSE
ADLPFGGIKRSGMGRELGPLGIEEFMNKKPIRL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgtacacagtcatcaacccggcgacgggtgagctggtcgacgaaatcccgaacgcggcc
gacgaggaggtccgcgacgcgatcgaccgggtgcaccgcgggtacgcggcttggcgggcc
cggccggtcgccgaacgcgccgcgatcgtgcggcgcgcgggggagctgttcgccgagcgc
gcggacgagctcgccgcgatcatgacgctggagatgggcaagcggatcaacgaaggccgc
ggcgaattgggcgtcgtcgccgacatcttccggtactacggcgagcgcggcccggacctg
ctggcggacgagcccctggccatccgcggcggcgaggcggtgctgacgaaggagccgatc
ggggcactgctgggcgtgatgccgtggaacttcccgtgttaccaggtcgcccggttcgtg
gcgccgaacctggtgctgggcaacacgatcctgctcaagcacgcgtcgatctgcccgcgt
tcggcggtcgcgatcgaggcggtgctgcgggacgccggcgtgccggcggacgcgtacgtg
aacgtgttcgcgtcgagccgccaagttccgtggatgctcgcggacccgcgcctcgccggg
gtgtcgctgaccggcagtgagcaggcgggcatctcggtggcggccgaagccgggcgcaac
ctcaagaagtgcgtcctggaactgggtggctcggacccgctgatcgtgctggacaccgac
gacctcgacgagacggtcaagatcacggcgacggcccggatgcgcaactgcggccagtcg
tgcaacgcgccgaagcgcatcatcgtgctgggcgggtggtacgaagagttcaccgaccgg
ttcgccaagcgcgtgacggagtactacgtcccgggcgacccggccgacccgtcgacaacc
ctgcccccgctggcctcgagcgcggcggcggacgaggtgtcggcccagatagagacggcg
atccgcgaaggagcaacgctgcgcgcgggcggccaccgcatcccgggcccgggcgcgtac
gtggaggcaacggtcctgacggaggtgacgcccgagatggcggcgtaccacgaggagatc
ttcggcccggtggcgctgctgttccgggcggagacggaggaagaggcggtcgccctggcc
aacgacacaccattcgggctgggggcaagcgtgttcgcagccgaccgaacccgggcggct
cgcgtggcgcggaggatcgaggcgggaatggtgtacgtgaacaagtcgggcgggtcggag
gcggacctgccgttcggcgggatcaagcggtcgggcatgggacgcgagctggggccgttg
gggatcgaggagttcatgaacaagaagcccatccgcctctga
DBGET
integrated database retrieval system
