Amycolatopsis mediterranei S699: AMES_8543
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Entry
AMES_8543 CDS
T02190
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amm
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amm03021
]
AMES_8543 (rpoE)
Transcription machinery [BR:
amm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMES_8543 (rpoE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_30
HTH_23
HTH_24
MarR_2
Sigma70_r3
HTH_AsnC-type
GerE
Motif
Other DBs
NCBI-ProteinID:
AFO82075
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Position
9528148..9528741
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AA seq
197 aa
AA seq
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MQVIHEGSELREPDRPDLGGPEPGPAFGRLFDAHAGQLRRYLARRVGAEPANDLVAETFL
VALRRRETYRPELGTARSWLYGIATNLLRHHVRSELRGLQATARLARTGEVSHANHDGRV
AEQVDAQVRAAQLAGALARLSPADRDTLLLVSWAGLEPGEVAEALGIPPGTVRSRLHRIR
RWLRTNAPAQEEVQDLA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatccacgagggctcggagctccgggagcccgaccgcccggacctgggcgga
cccgagccggggccggcgttcgggcggctgttcgacgcccatgccgggcagctgcggcgg
tacctcgctcgccgcgtcggggcggaaccggcgaacgatctcgtggccgagacgttcctg
gtcgcgttgcggcggcgcgagacctaccggccggagctgggcaccgcgcggtcgtggctc
tacggcatcgccaccaacctgctgcgccaccacgtgcggtccgaactgcgcggcctgcag
gccaccgcccggctcgcccggaccggcgaagtcagtcacgcgaaccacgacggccgcgtc
gccgagcaggtcgacgcccaggtgcgggccgcgcagctggccggcgcgctggcccggctc
agcccggccgaccgcgacacgctgctgctcgtgtcgtgggccgggctggagccgggcgag
gtcgccgaggccctcggcatcccgccgggtacggtccggtcgcggttgcaccggatcaga
cgctggctcaggacgaacgccccggctcaagaggaggtgcaggaccttgcgtga
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