Amycolatopsis mediterranei S699: RAM_00380
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Entry
RAM_00380 CDS
T01822
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_00380
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_00380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Xre-like-HTH
GerE
HTH_AsnC-type
Sigma70_ECF
HTH_24
HTH_10
HTH_23
HTH_28
DUF134
HTH_30
HTH_Tnp_ISL3
HTH_17
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AEK38571
UniProt:
A0A9R0NQ59
LinkDB
All DBs
Position
81406..81927
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AA seq
173 aa
AA seq
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MTAAPVLDSEHFTEVHDRHFADIYRYVAGRLGAQAAEDVAAETFLVAFDRRKTFDASRGD
MRAWLFGIATNLVSRHRRKEARHYRALSRLDPRETTEGHENRVVDAVVAARVGKALSRLS
TGERDVLLLVALGELGYAEVAEALGISPGTVGSRLNRARKKLNPVLSQEASDE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggccccggtgctggacagcgagcacttcacggaagtgcacgatcgccacttc
gcggacatctaccggtacgtcgccggccgcctcggtgcccaggccgcggaggacgtcgcc
gccgagacgttcctcgtcgccttcgaccgccggaagacgttcgacgccagtcgcggtgac
atgcgggcctggctgttcggcatcgcgacgaacctggtctcccggcaccgtcgcaaggag
gcccgccactaccgcgcgctctcgcggctcgacccgcgcgaaaccaccgaagggcacgaa
aaccgcgtcgtcgacgcggtcgtggccgcgcgggtggggaaggcgttgtcccggctttcc
accggggaacgcgacgtcctgctgctcgtcgccctcggcgagctcggctacgcggaggtg
gccgaggcgctcggcatctccccgggcaccgtcggctcccggctgaaccgcgcccgcaag
aagctcaaccccgttctttcccaggaggcttccgatgaatga
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