Amycolatopsis mediterranei S699: RAM_05425
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Entry
RAM_05425 CDS
T01822
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_05425
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
TnsD
Motif
Other DBs
NCBI-ProteinID:
AEK39577
UniProt:
A0A9R0NS46
LinkDB
All DBs
Position
1126269..1126880
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AA seq
203 aa
AA seq
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MEVPAPAMQNAVADTGAKPVTLDEAAWTPPSWDEVVREHGDRVYRLAYRLTGNAHDAEDL
TQETFIRVFRSLASYKPGTFEGWLHRITTNLFLDMARRRSRVRMEGLPEDTDRIVGDDPS
PEQVYSDTHLDPDLQAALDELPPEFRAAVVLCDVEGLSYEEIGATLNVKLGTVRSRIHRG
RQALRASLERRRAHAPQSAKVTV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcctgctcccgcgatgcagaacgccgttgccgacaccggggccaagcccgtg
accttggacgaggcggcgtggacgccgccgtcctgggacgaggtcgtgcgcgaacacggc
gaccgcgtctaccggctcgcctaccgcctgaccggcaacgcccacgacgccgaggacctc
acgcaggagaccttcatccgggtcttccgctcgctcgcgtcctacaagcccggcacgttc
gagggctggctgcaccggatcaccaccaacctgttcttggacatggcccgccgccgctcg
cgcgtgcggatggaaggcctgcccgaggacaccgaccgcatcgtgggcgacgacccgagc
cccgagcaggtctactcggacacgcacctggacccggacctgcaggcggcgctcgacgag
ctgcccccggagttccgtgccgccgtggtgctgtgtgacgtcgaagggctgtcgtacgag
gagatcggcgcgacgctgaacgtcaagctgggcacggtccgcagccgcatccaccgcggg
cgtcaggcgctgcgcgcgtcgctcgagcgtcgtcgcgctcacgcaccgcagtctgcgaag
gtgacggtatga
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