Amycolatopsis mediterranei S699: RAM_17895
Help
Entry
RAM_17895 CDS
T01822
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_17895
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_17895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AEK42065
UniProt:
A0A9R0NWR6
LinkDB
All DBs
Position
3807722..3808399
Genome browser
AA seq
225 aa
AA seq
DB search
MTVTLFLHRRGYARAVTKLPPDDELVAALRAGDGAAFADVLDAWSSSMLRLARSFVSTHA
TAEEVVQDTWLAVVKGLSAFEGRSSFKTWVYRILVNTAKKRGTHEKRSVPWTSLLPGDED
HGPTVDPSRFQGPGGAYPGHWRETPEPWASPEKTALALEIREIITGVLDELPARQRAVIS
LRDVGDHTAEEVCAMLQISAANQRVLLHRARAVVRARLAGYLGVA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcacccttttcctccaccgccggggctacgctcgggcggtgaccaagctgccc
ccggacgacgaactcgtcgcggcgctgcgggccggtgacggcgcggcgttcgcggacgtg
ctcgacgcctggtcgtcgtcgatgctgcggctggcccgatcgttcgtctcgacgcacgcc
accgccgaggaggtcgtgcaggacacctggctcgcggtcgtgaaaggactgtccgccttc
gaaggcaggtcgtcgttcaagacctgggtgtaccgcatcctggtcaacacggccaagaaa
cgcggcacgcacgaaaagcgcagcgtcccctggaccagcctgctgcccggcgacgaggac
cacggtccgaccgtggaccccagccggttccaggggcccggcggcgcctaccccggacac
tggcgggagactcccgaaccgtgggcctcgccggagaaaaccgcactggcgctggaaatc
cgtgagatcatcacgggtgtgctggacgagttgcccgcccggcagcgcgcggtgatcagc
ctgcgcgacgtcggcgaccacaccgccgaggaggtctgcgcaatgctgcagatctccgcg
gccaaccagcgggtgctgttgcaccgcgcccgcgcggtcgtccgcgcgcggctggccggg
tacctgggggtggcgtga
DBGET
integrated database retrieval system
