Amycolatopsis mediterranei S699: RAM_26870 Help Entry RAM_26870         CDS       T01822                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism amn  Amycolatopsis mediterranei S699 Pathway amn03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:amn00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     RAM_26870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amn03400]     RAM_26870 Enzymes [BR:amn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      RAM_26870 DNA repair and recombination proteins [BR:amn03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      RAM_26870 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_N DNA_ligase_A_M Motif Other DBs NCBI-ProteinID:  AEK43851 UniProt:  A0A9R0P060 LinkDB All DBs Position 5851633..5852700 Genome browser AA seq 355 aa AA seqDB search MADKLEEYRGKRARDRTSEPWPDGPPAPGDNDLFVIQEHHATRLHWDFRLERDGVLVSWA VPKGLPLSPGVPRLAVHTEDHPMEYLTFSGEIPAGEYGGGRMTVWDTGKYETLHWNDHKV EVVFHGERARGKYLFTNRHDEDDRDWTLRRLDPAEPGHEDAPEFVEPMTAVPGELPADDD EWAYEFAWGGLRTMLLVCGGRVTAHDETGADVTARYPELHKLGEQLGSTEVLLDGEVVVV KDGKPDPDGLDERRRADGAAAKRLKASCPVFYFASDVLHLEGRATLELPYTKRRELLDGL PIEDRHWQVPRYYLGGGEAVAGASRQHGLPGVVAKRADSPYQPGGGPGDWLLIRN NT seq 1068 nt NT seq  +upstreamnt  +downstreamnt atggccgacaaactcgaggaataccgcggcaagcgcgctcgcgaccgcacctccgagccc tggccggacggcccgcccgcccccggggacaacgacctcttcgtcatccaggagcaccac gccacccggctgcactgggacttccggctggaacgcgacggggtgctcgtgtcgtgggcg gtgccgaagggcctgccgctctcccccggcgtgccgcggctcgccgtgcacaccgaagac caccccatggagtacctgaccttctccggcgagatccccgcgggcgagtacggcggcggc cggatgaccgtgtgggacaccgggaagtacgaaaccctgcactggaacgaccacaaggtc gaggtggtcttccacggcgaacgcgcgcgcggcaagtacctgttcaccaaccggcacgac gaagacgaccgcgactggaccctgcggcgcctcgaccccgccgaacccggccacgaagac gcgcccgagttcgtcgagccgatgacggcggtcccgggcgagctgcccgcggacgacgac gagtgggcctacgaattcgcctggggcggcctgcgcacgatgctgctggtgtgcggcggc cgcgtcaccgcgcacgacgaaaccggcgccgacgtcacggcgcgctatcccgagctgcac aagctgggcgagcagctcgggtccacggaagtgctgctggacggcgaagtcgtcgtggtc aaggacggcaagcccgacccggacggcctcgacgagcgccgccgggccgacggtgccgcc gccaagcggctcaaggccagctgcccggtcttctacttcgcttccgacgtcctgcacctc gagggccgggcgacgctcgagctgccgtacacgaagcgccgggagctgctcgacggcttg ccgatcgaggaccggcactggcaggtcccgcggtactacctgggcggcggcgaggccgtc gcgggcgccagccgccagcacggcctgcccggcgtcgtcgcgaaacgggccgacagcccg taccagccgggtggcggccctggcgactggctgctgatcaggaactga

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