Amycolatopsis mediterranei S699: RAM_31165
Help
Entry
RAM_31165 CDS
T01822
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_31165
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_31165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_38
MarR_2
GIDA_C
HTH_Tnp_1
GerE
Motif
Other DBs
NCBI-ProteinID:
AEK44708
UniProt:
A0A9R0P1R3
LinkDB
All DBs
Position
complement(6733962..6734615)
Genome browser
AA seq
217 aa
AA seq
DB search
MNTMVALRSAHAPPVELRVALLSSTTQNTVGRTRVAIGGRRPKKAKGEDLIRQLYAEHGR
SLLAYATRLTGDRAAAEDVVQETLVRAWKHADDLQNDGKGSVRGWLLTVARNLVTDRARA
RAARPQEVAEPAEGVPTPAVERDHAQGVVDSMTVLGAMDGLSNEHREVLVEIYYRGRTVA
EAARTLGVAPGTVKSRSYYALRALRAAMISSGTEVAR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatggtcgcgctgcgctcggcgcacgcaccgccggtggagctaagggttgca
ctactgtcctcgacgactcagaacaccgtcgggaggacgagggtggccataggaggcagg
cggcctaagaaggccaaaggcgaagacctcattcggcagctgtacgccgaacacgggcga
agcctgctggcctacgcgacgaggctgaccggagatcgggcggcagccgaggacgtggtc
caggagacgctggtccgggcgtggaaacacgctgacgacctgcagaacgacgggaaaggc
tcggtgcgcggctggttgctgaccgtcgcgcgcaacctggtcaccgaccgggcacgggcc
cgggcggcccggccacaagaggtggccgaaccggccgaaggcgtgccgaccccggccgtc
gagcgagaccacgcccaaggggtggtcgactcgatgaccgtgctcggggcgatggacggg
ctgtccaacgagcatcgagaggtcctggtggagatctactaccggggacggacggtggcc
gaagcggcgagaacactgggcgtcgcaccgggtaccgtgaaatcaaggtcttactacgca
ctacgagcactcagagcagcgatgatttcgagcggaacggaggtggcgcgatga
DBGET
integrated database retrieval system
