Amycolatopsis mediterranei S699: RAM_31710
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Entry
RAM_31710 CDS
T01822
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_31710
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_31710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
DUF4440
RWP-RK
SnoaL_3
HTH_23
NTF2
Motif
Other DBs
NCBI-ProteinID:
AEK44815
UniProt:
A0A9R0P227
LinkDB
All DBs
Position
complement(6837787..6838761)
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AA seq
324 aa
AA seq
DB search
MRDAKTDQFDAATAPFRRELFAHCYRMTGSIGDAEDLVQETYLRAWQAFDRFERRSSVRT
WMYRIATNACLSALHRNRRRPLPSGLGPPSTDPHAATAPAPAGVSWLEPVPDRLVVDDLS
DPAEVVAARHRVRLALVAMLQLLPPRQRAAVILAEALDLPAVAAAEILNVSVTAVKSLLQ
RGRARLAEAALSEVDVAEPTDQGARRALDRYMAAFEQADHAAIKRLLAEEAVLEMTGTST
WFSGKATCAPFITAQAIGHPGDWAMVPLRVNGQLGAAAYHRDSDQTYRAFAIVVLATTRS
HLNRITLFSDPGLFGHFALPPQWR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgcgaagaccgaccagttcgacgcggcgaccgcgcccttccggagggagctg
ttcgcccactgctaccggatgaccggctcgatcggcgatgccgaagacctcgtccaggag
acctacctgcgggcctggcaggctttcgaccgcttcgagcggcggtcgtcggtgcgcacc
tggatgtaccggatcgccaccaacgcttgcctcagcgcactgcaccgcaaccggcggcgg
ccacttccgtccgggctgggaccaccatcgaccgatccccacgccgcgaccgcgccggca
ccggccggggtgagctggctggagccggtcccggaccgcctggtcgtcgacgacctgtcc
gatcccgccgaggtcgtggccgcccgccatcgcgtccgcctcgccctggtggcgatgttg
caattgctgccgccgcgccagcgggccgccgtgatcctcgccgaggcgctcgacctgccc
gcggtcgcggcggccgaaatcctgaacgtgtcggtgaccgcggtcaagagcctgctgcag
cggggccgggctcgtctggccgaagccgccctcagcgaggtcgacgtggccgagccgacc
gatcagggtgcccgccgggctctcgaccggtacatggccgcgttcgagcaagccgatcac
gccgccatcaagcgcctgctggccgaggaggccgtgctcgagatgacgggaaccagcacg
tggttttccgggaaggcgacctgcgcaccgttcatcaccgcccaggccatcggccacccc
ggtgattgggcgatggttcccctgcgggtcaacggacagctcggcgcggcggcctaccat
cgcgacagcgaccagacctaccgcgccttcgcgatcgtcgtgctggccacgacgcgatct
cacctcaaccgcatcaccttgttcagcgatcccgggcttttcggacacttcgcgttaccg
ccccaatggcggtag
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