Amycolatopsis mediterranei S699: RAM_44515
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Entry
RAM_44515 CDS
T01822
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_44515
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_44515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_30
HTH_23
HTH_24
MarR_2
Sigma70_r3
HTH_AsnC-type
GerE
Motif
Other DBs
NCBI-ProteinID:
AEK47370
UniProt:
A0A9R0UDZ2
LinkDB
All DBs
Position
9518236..9518829
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AA seq
197 aa
AA seq
DB search
MQVIHEGSELREPDRPDLGGPEPGPAFGRLFDAHAGQLRRYLARRVGAEPANDLVAETFL
VALRRRETYRPELGTARSWLYGIATNLLRHHVRSELRGLQATARLARTGEVSHANHDGRV
AEQVDAQVRAAQLAGALARLSPADRDTLLLVSWAGLEPGEVAEALGIPPGTVRSRLHRIR
RWLRTNAPAQEEVQDLA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatccacgagggctcggagctccgggagcccgaccgcccggacctgggcgga
cccgagccggggccggcgttcgggcggctgttcgacgcccatgccgggcagctgcggcgg
tacctcgctcgccgcgtcggggcggaaccggcgaacgatctcgtggccgagacgttcctg
gtcgcgttgcggcggcgcgagacctaccggccggagctgggcaccgcgcggtcgtggctc
tacggcatcgccaccaacctgctgcgccaccacgtgcggtccgaactgcgcggcctgcag
gccaccgcccggctcgcccggaccggcgaagtcagtcacgcgaaccacgacggccgcgtc
gccgagcaggtcgacgcccaggtgcgggccgcgcagctggccggcgcgctggcccggctc
agcccggccgaccgcgacacgctgctgctcgtgtcgtgggccgggctggagccgggcgag
gtcgccgaggccctcggcatcccgccgggtacggtccggtcgcggttgcaccggatcaga
cgctggctcaggacgaacgccccggctcaagaggaggtgcaggaccttgcgtga
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