Amycolatopsis methanolica: AMETH_4584
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Entry
AMETH_4584 CDS
T03230
Symbol
gabD
Name
(GenBank) putative 6-oxohexanoate dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00250
Alanine, aspartate and glutamate metabolism
amq00310
Lysine degradation
amq00350
Tyrosine metabolism
amq00650
Butanoate metabolism
amq00760
Nicotinate and nicotinamide metabolism
amq01100
Metabolic pathways
amq01120
Microbial metabolism in diverse environments
Module
amq_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AMETH_4584 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AMETH_4584 (gabD)
00310 Lysine degradation
AMETH_4584 (gabD)
00350 Tyrosine metabolism
AMETH_4584 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AMETH_4584 (gabD)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AMETH_4584 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AMETH_4584 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AMETH_4584 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIJ24676
UniProt:
A0A076N0R4
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Position
complement(4717664..4718731)
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AA seq
355 aa
AA seq
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MLADEPLNIAGSGEAVLRTEPIGVLLGIMPWNFPYYQVSRFAAPNLVLGNTILLKQARNC
PQGALAIEELFTEAGAPEGIYLNLFADSERIAGLIGDLRGQGVSLTGSERAGSAVAEVTG
RHLKKYVFELGGSDPFAVLDDHNLDTTVAHAVHNRLFNGDQACTALKRFIVHADVHDAFL
ERFVHAMREIRPGDPTDPATRLGPLASGEVVADLTAQVEDALALGATLHTGGGRVAGPGH
YFEPTVLTGVTPAMRAHSEELFGPVAVVHRVASEADALALANESPFGLAASIYTADVERA
RALATHLECGMVWINSTTRSAPDLPFGGVKRSGVGRELGALGITEFANKKLVRIP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgctggccgatgagccgttgaacatcgcgggcagcggggaagcggtgctgcgcacggag
ccgatcggggtgctcctcgggatcatgccgtggaacttcccctactaccaggtgtcgcgg
ttcgcggcgccgaacctggtgctgggcaacacaattctgctcaagcaagcacgcaactgc
ccccaaggggcgctggcgatcgaggagctgttcaccgaagccggggcgccggagggaatc
tacctgaacctcttcgccgacagcgagcggatcgccgggctgatcggcgatctacggggg
cagggtgtgtcgctgaccgggtccgagcgcgccgggtccgcggtcgccgaggtcaccgga
cgccacctgaagaagtacgtgttcgaactcggcggttcggacccgttcgccgtcctcgac
gaccacaacctcgacaccaccgtcgcgcacgcggtgcacaaccggttgttcaacggggac
caggcgtgcacggccttgaagcggttcatcgtgcacgccgacgtgcacgacgcgttcctc
gagcggttcgtccacgcgatgcgcgagatccggcctggcgatcccaccgaccccgccact
cgcctggggccgctggcctccggtgaggtggttgcggacctgaccgcacaggtcgaggac
gcgctcgcgctcggcgccacgctgcacaccggtggcggccgggtggccggccccggccac
tacttcgagccgacggtcctcaccggggtcaccccggccatgcgcgcccactcggaggaa
ctgttcggcccggtcgccgtggtccaccgggtcgcgtccgaggcggacgccctcgctctg
gccaacgaatcgccgttcgggctggccgcctcgatctacaccgccgacgtcgagcgggcc
cgggcgttggcgacgcacctggagtgcggcatggtgtggatcaacagcaccaccaggagc
gcaccggacctgccgttcggcggggtgaagcgctccggcgtcggccgcgagctgggcgcg
ctgggcatcaccgagttcgccaacaagaaactcgtgcgcattccgtga
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