Amycolatopsis methanolica: AMETH_5843
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Entry
AMETH_5843 CDS
T03230
Symbol
sbcC
Name
(GenBank) DNA repair ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_5843 (sbcC)
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMETH_5843 (sbcC)
Archaeal homologous recombinant proteins
AMETH_5843 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
AAA_22
TsaE
AAA_21
NACHT
Motif
Other DBs
NCBI-ProteinID:
AIJ25935
UniProt:
A0A076N540
LinkDB
All DBs
Position
complement(6024142..6027105)
Genome browser
AA seq
987 aa
AA seq
DB search
MRLHRLEVAAFGPYRSREVVDFDALGADGLFLLHGDTGAGKTTLLDAVAFALFGTVPGAR
GQVKRLRCDLAEPDEPTEVVLELTVQGQRLRLQRSPEYQRPKRRGEGTTTQQAKAVLQWV
GPPPAGQPAEGLTRIDEVGRTVQRLLGMSAEQFFQVVLLPQGEFARFLRADTDEREKLLE
RLFGTKRFAEVEGWFRERRADRRRELDQQRQELREWTARFAQVAGEDVPEEDVAGWVART
GERIRSSVEQARDDEKRARAARESADELLAERLSAAERVRRVREAHRRLAALAEQEEERK
RWAAELEAARRAAAVVGVAAQADRCAAQLDEAREAEDRKAAALAATGFADVQADTADLRK
LSGKLREEAGALAGLVAEAEQQVRDQRDIERHAEAASEARARVQVLGEKLAGIPERARDL
RERLDVAIDAEAKLGEVRKRESELVAAVRDAERLPAAERAVADAGAAARVAIDQHQEARE
RFLELRRWRLDGMAAELASRLTSGSPCPVCGSSDHPAPAMAAPEAVSPEQEQAAEEAESR
AERRRKAAEAAKHDAETKLAALRERLRGRTGAQLTEELSLLRREIAGLDALAQQRAPLAK
QVQAAETEQRELEEKRAAELQAATAAETQHRALTERVAERARRLEEARGGHPDVAARRAH
LTGIVRALDALAEVRSAAASAAEQLERQRAEVREALWRAGFETVDEMRAAARDEATVRDL
EKRLADARAAEAAARATLNEPELFGVGPDDEVDVESARAKAQAARERAEAAVAVLRSATA
QADALGTLAERLAAATERLRPLEEEFAELDALTDVVNGRGQNARKMSLRSYVLAARLEEV
AIAATARLQTMSQGRYSFVHSDAAGSHGTRGGLGLDVLDDFSGTVRPAKTLSGGESFLAS
LSLALGLADVVAAETGGSLLDTLFVDEGFGTLDSETLDVVMNILDELRAGGRVVGLVSHV
EELRQRIPTRLRVRKSRTGSSLELQMA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcaccggctggaggtggcggccttcggaccgtaccggtcccgggaggtcgtc
gacttcgacgcgctcggcgccgacgggctcttcctgctgcacggcgacaccggcgcgggc
aagacgacgttgctggacgcggtggcgttcgcgttgttcggcacggttcccggcgcgcgc
ggtcaggtcaagcgcctgcgctgcgacctggcggaaccggatgagccgaccgaggtcgtg
ctcgaactgaccgtgcaggggcagcggctgcggttgcagcgcagccccgagtaccagcgc
ccgaaacggcgcggcgagggaacgacgacgcaacaggcgaaggcggtgctccagtgggtc
ggcccgccgcccgccggccagccggctgagggtctgacgcggatcgacgaggtcggccgc
acggtccagcgtctgctcgggatgagcgcggagcagttcttccaggtcgtgctgctgccg
cagggcgagttcgcccggttcctgcgcgcggacaccgacgagcgcgagaagctgctggag
cggctcttcggcaccaagcggttcgccgaggtcgagggctggttccgggagcggagggcg
gaccggcggcgcgaactcgaccagcagcgccaggaactgcgcgagtggacggcgcggttc
gcccaggtggccggggaggacgtgcccgaagaggacgtggcgggctgggtcgcgcgcacc
ggcgagcggatccggtccagcgtggagcaggcccgcgacgacgagaaacgtgccagggcg
gcgcgtgaatcggctgatgagctgctggccgagcggctgtcggcggcggaacgcgtccgc
cgggtgcgggaggcgcaccggcggctcgcggcactggccgagcaggaagaggaacggaag
cgctgggccgccgagctcgaggcggcgaggcgagcggcggcagtggtgggtgtcgcggca
caggcggaccggtgcgcggcgcagctggacgaagcccgcgaggccgaggaccgcaaggca
gcagcgctcgcggcgacgggcttcgcggacgtgcaggcggacaccgcggacttgcgcaag
ctgtccggaaagctgcgtgaggaggccggtgcgctcgccgggctggtggccgaggccgag
cagcaggttcgcgatcaacgggacatcgagcgtcacgccgaggcagcgagcgaggcgagg
gcccgcgtccaggtgctcggggagaagctggcgggcatcccggagcgtgcgcgagacctg
cgggagcgcctcgacgtcgcgatcgacgccgaggcgaagctcggtgaggtccgcaagcgc
gagagcgaactggtcgccgcggtccgggacgcggagcgcctgcccgcggccgagcgcgcc
gtggcggacgccggagcggcggcgcgggtggccatcgaccagcaccaggaggcgcgcgaa
cggttcctcgagctgcgaaggtggcggctcgacgggatggcggccgagctggcgtcccgg
ttgacgtccggctcgccgtgcccggtgtgtggttcctccgatcacccggctccggccatg
gccgcgccggaggccgtttcaccggagcaggagcaggcggcggaagaggcggagagccgg
gcggagcggcgccgcaaggcggcggaggcggccaagcacgacgccgaaacgaagctcgcg
gccctgcgtgaacgtctgcggggccggaccggcgcgcagctgaccgaggaactttccttg
ctgcgcagggagatcgccgggctcgacgcgctggcgcaacagcgggcgccgctcgcgaag
caggtgcaggcagccgagaccgagcaacgggagctggaagagaagcgcgcggccgaactg
caggcggccacggccgccgagacccagcaccgggcgctgaccgagcgtgtcgccgaacgc
gcccggcgcctggaggaggcgcgcggtggccaccccgacgtcgccgcccgccgcgcgcac
ctgacggggatcgtgcgagcgctggacgccctggccgaggtgcggtccgcggccgcgagc
gccgccgaacagctcgagcgtcagcgtgcggaggtccgggaagcgctgtggcgggccggt
ttcgagaccgtggacgagatgcgggccgccgcgcgtgacgaggcgacggtccgtgatctg
gagaagcggctggccgatgcccgtgcggcggaggcggcggcgcgggccacgctgaacgag
cccgagctgttcggggtcgggccggacgacgaggtggacgtcgagtcggccagggcgaaa
gcacaggcggcgcgggaacgggccgaggctgcggtcgctgtcctgcggtcagcgacggcc
caagccgatgcgctgggcacgctggccgagcggctggcggccgccaccgagcggctgcgg
ccgctggaagaggagttcgccgagctcgacgcgctgaccgacgtggtcaacgggcgcggg
cagaacgcgcggaagatgtcgctgcggtcgtacgtgttggcggcccggctggaagaggtg
gccatcgccgcgacggcgcggttgcagacgatgagccagggccgctactcgttcgtgcac
tccgatgcggccggatcgcacggcacgagaggcggactgggactggacgtgctggacgac
ttctccggcacggtccgtccggcgaagacgctgtccggcggggagtcgttcctcgcgtca
ctgtcgctggccctcgggctggccgacgtggtcgcggcggagaccggcggctcgctgctg
gacacgctgttcgtcgacgagggcttcgggacgctcgactccgagaccctcgacgtggtg
atgaacatcctcgacgagctgcgggccggtggccgggtggtcggcctggtgtcccacgtg
gaggagctgcggcagcggatcccgacccggttgcgggtgcgcaagtcccgcaccgggtcg
agtttggagctgcagatggcgtga
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