Amycolatopsis methanolica: AMETH_6096
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Entry
AMETH_6096 CDS
T03230
Symbol
choD
Name
(GenBank) FAD dependent oxidoreductase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00984
Steroid degradation
amq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
AMETH_6096 (choD)
Enzymes [BR:
amq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
AMETH_6096 (choD)
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
DAO
GMC_oxred_N
FAD_binding_2
Pyr_redox_2
NAD_binding_8
Fer4
Fer4_21
Fer4_9
Fer4_10
FAD_binding_3
Fer4_7
Pyr_redox
Fer4_6
HI0933_like
Fer4_2
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AIJ26188
UniProt:
A0A076N025
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Position
6291561..6293285
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AA seq
574 aa
AA seq
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MTMSYDYDVVVIGSGFGGSVTALRLTEKGYRVGVLEAGRRFDESSYPKTSWDVRNFLWAP
KLGCFGLQRIALLRDVVVLAAAGVGGGSLLYANTLYEPSSDSFYNDPQWRDITDWRAELA
PHYDQAKRMLGVVRNPLHTPADTVMREVAEDMGVGDTFRLTPVGVLFGPEGTKPGTEIAD
PFFGGAGPTRRTCIGCGSCMTGCRHNAKNTLPKNYLHLAEANGAQVHPLTTVTEVRPLPG
GGYAVRTVRTGKAPSPKHARTFTAEQVVFAAGTYNTQKLLHRLRDDGALPNISRRLGELT
RTNSESILSAKSRLPGTDYSTGIAITSSFHPDENTHVEPVRYGKGSNAMALLQTALTDGG
GRVPRWLRWLKEIASNPRHLSWHLWPRRWSEKSIILLVMQSLDNSITVFGRKGLFGRHKL
SSKQGHGEPNPSWIPAANDAARRTAEKIDGIAGGTIGEIANIPLTAHFIGGCPIGDSPDS
GVIDPWHRLYGHPGLHVIDGSTVSANLGVNPSLTITAQAERAMSFWPNKGQPDPRPPVGE
RYRRLPAVEPKRPAVPSGAPGALRLPVVEVRSKR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgagctatgactacgacgttgtggtgatcggctccggcttcggcggctcggtc
acggcgttacgcctgaccgaaaagggctaccgtgtcggcgtgctcgaggccggcaggcgg
ttcgacgagtccagctatccgaagacgtcctgggatgtgcggaacttcctctgggcaccc
aaactcggctgtttcgggctgcagcgcatcgccctgctgcgcgatgtcgtcgtactcgcc
gcggccggggtcggcggcggctcgctgctgtacgccaacacgctgtacgaaccgtcgtcc
gactccttctacaacgacccgcagtggcgtgacatcaccgactggcgcgcggaactcgcc
ccgcactacgaccaggccaagcggatgctcggcgtggtgcgcaacccgctgcacaccccg
gccgacacagtgatgcgcgaggtcgccgaggacatgggcgtcggcgacaccttccggctg
accccggtcggggtgctcttcggcccggagggcacgaaaccgggcaccgagatcgccgac
ccgttcttcggcggcgccgggcccacacgccggacctgcatcggctgcggttcatgcatg
accggctgccggcacaacgcgaagaacacgctgccgaagaactacctgcacctggccgaa
gccaacggcgcgcaggtgcatccgctgaccacggtcaccgaggtgcgcccgctacccggc
ggcgggtacgccgtgcgcacggtccgcaccggcaaggcgccgagcccgaagcacgcccgc
accttcaccgcagagcaggtggtgttcgccgccggcacctacaacacgcagaagctcctg
caccggctgcgcgacgacggcgccctgccgaacatctcgcgccggctcggcgagctcacc
cgcaccaactccgaatccatcctgagcgccaagtcacggctgcccggcaccgactacagc
accgggatcgccatcacgtcctcgttccatcccgacgagaacacccatgtcgagccggtc
cggtacggcaagggcagcaacgcgatggcgctgctgcagaccgcgctgaccgacggcggc
gggcgggtgccccgctggctgcgctggctgaaagaaatcgccagcaacccccggcacctg
tcctggcacctctggccgcgccgctggtcggagaagtcgatcatcctgctggtcatgcag
tcgctcgacaactcgatcaccgtcttcggccgcaagggactcttcgggcgccacaagctc
agctcgaagcagggccacggcgagccgaaccccagctggatcccggccgcgaacgacgcc
gcgcggcgcaccgcggagaagatcgacggcatcgcgggcggcacgatcggcgagatcgcg
aacatcccgctgaccgcgcacttcatcggcggctgcccgatcggcgactcgccggacagc
ggtgtgatcgacccatggcaccggctctacggccacccggggctgcacgtgatcgacggc
tccacggtctcggcgaacctgggtgtcaacccctcgctcaccatcaccgcgcaggccgag
cgggcgatgtcgttctggccgaacaaggggcagccggatccccggccaccggtcggcgag
cgctaccgacgactgcccgccgtcgaaccgaagcggccggccgtcccgagcggcgcgccg
ggggcgctgcggctgccggtcgtcgaggtgcgctcgaagcgttga
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