KEGG   Actinoplanes missouriensis: AMIS_10800Help
Entry
AMIS_10800        CDS       T01795                                 

Definition
(GenBank) putative DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ams  Actinoplanes missouriensis
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:ams00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    AMIS_10800
   03410 Base excision repair
    AMIS_10800
   03420 Nucleotide excision repair
    AMIS_10800
   03430 Mismatch repair
    AMIS_10800
Enzymes [BR:ams01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AMIS_10800
    6.5.1.6  DNA ligase (ATP or NAD+)
     AMIS_10800
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AMIS_10800
DNA replication proteins [BR:ams03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AMIS_10800
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AMIS_10800
DNA repair and recombination proteins [BR:ams03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AMIS_10800
   NER (nucleotide excision repair)
    Other NER factors
     AMIS_10800
   MMR (mismatch exicision repair)
    Other MMR factors
     AMIS_10800
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1150795..1152294
Genome map
AA seq 499 aa AA seqDB search
MGHVRFIDIAATSAAVSSTSGRKAKIELLADALRRLGPEEITAGAAFLAGELRQRQTGVG
YAGLRDLPPPAAEASLTVAGVDAAIAEIAVVAGAGSQARRRELIGALFGAATADEQRLLV
GLFGGELRQGAQAGLLAEAVASAAAVPVTAVRRALLLCGDLKQVAVAALTGGAPALAEIS
LRVGTPLSPMLASSAPDVGAALLATGTPAVIDTKLDGIRIQVHRSGDDVAIFSRSLDDIT
ARLPGVVEAVRALPLREAVLDGEAMALGADGRPRPFQETVTKGVTLVPYFFDLLHLDGTD
LLDEPGRVRWAALADAVPGELAVGRSTAETEEEAAAVFAAALAAGQEGVVVKSPDAAYDV
GRRGAAWVKVKPRHTLDLVVLAVEWGNGRRKGWLSNLHLGARDPSTGEFVMLGKTFKGLT
DELLRWQTERFKELAVSDDGWVVRVRPEQVVEIAFDGVQTSPRYPGGVALRFARVLRYRD
DKRAAEADTIDAVRALHVA
NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt
atgggtcacgtgcggttcatcgacatagctgccacatcggcggccgtcagctcgacctcg
gggcgcaaagccaagatcgagctgctggccgacgccctgcgccgcctgggtccggaagag
atcacggccggtgcggcgttcctcgccggcgagctgcgtcagcggcagaccggtgtgggg
tacgccgggctgcgcgacctgccaccaccggcggccgaggcgagcctcacggtcgccggg
gtggacgccgcgatcgccgagatcgcggtggtcgccggcgccggatcgcaggcccgccgg
cgcgagctgatcggcgcgctcttcggcgctgccaccgccgacgagcagcggctgctggtc
ggcctcttcggtggcgagctgcgccagggcgcgcaggccgggctgctggccgaggcggtc
gcctcggccgccgcagtgccggtcaccgcggtccgccgcgcgttgctgctctgcggtgac
ctgaaacaggtcgccgtcgcggcgctgaccggcggcgcacccgccctcgccgagatcagt
ctgcgggtcggcaccccgctgagcccgatgctggcgagcagcgcgcccgacgtcggcgcg
gccctgctcgccaccggcacgccggcggtgatcgacaccaagctggacggcatccgcatc
caggtgcaccggtccggcgacgacgtggcgatcttcagtcgcagcctcgacgacatcacc
gcccggctgcccggggtggtagaggccgtccgtgccctgccgctgcgcgaggcggtgctg
gacggggaggcgatggcgctcggcgccgacggccggccccgcccgttccaggagaccgtg
accaagggcgtcaccctggtgccgtacttcttcgacctgctccacctcgacgggacggat
ctgctcgacgagcctggccgggtgcgctgggcggcgctggccgacgcggtgccgggggag
ctggcggtcggccggtccaccgccgagaccgaggaggaggccgccgccgtcttcgccgcc
gcgctggccgccgggcaggagggcgtcgtcgtcaagtcgcccgacgcggcgtacgacgtg
ggccggcgcggcgccgcgtgggtcaaggtgaaaccacggcacacgctcgacctggtggtc
ctcgccgtcgagtggggaaacggccgccgcaagggctggctgtccaacctgcatctcggc
gcccgtgacccgtccaccggcgagttcgtcatgctcggcaagacgttcaaggggctcacc
gacgagctgctgcgctggcagaccgagcggttcaaggagctggccgtctccgacgacggc
tgggtggtgcgggtgcggccggagcaggtggtcgagatcgccttcgacggcgtgcagacc
tcaccgcgctatccgggcggtgtggcgctgcggttcgcccgggtcctgcggtaccgcgac
gacaaacgggccgccgaggcggacaccatcgacgcggttcgcgcccttcacgtcgcctag

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