Actinoplanes missouriensis: AMIS_3570
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Entry
AMIS_3570 CDS
T01795
Name
(GenBank) putative ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMIS_3570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_3570
Enzymes [BR:
ams01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AMIS_3570
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMIS_3570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
BAL85577
UniProt:
I0GXU0
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All DBs
Position
373693..374637
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AA seq
314 aa
AA seq
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MPGPPLSPMLATAGPLPVGPEWSYEFKWDGVRVLALFGGGPPDLFARSGAVVTAAYPEIA
DLHLPEGTLLDGEMVVFDAAGRPSFTALAERMHVRDKARAARLAVSLPVTYMIFDLLFLD
GMDHTGLPYLARRERLEELGLAGPRWMVPPSFGDGAATADAARENHLEGVMAKRSDSVYL
PGHRSPDWVKVKFDRTGDYVIGGWRPGARKLGGLLIGVPTADGLAFRGRVGGGIGAVAEK
ELLARLEPLASGESPFAPGAVPREDSRGAHWVRPELVAEIRYGNQTPDRRLRFPRFLRLR
DDKTAAECADDEDA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggtccacccctgtcgccgatgctcgcgacggcgggcccgctgccggtggggccg
gagtggagctacgagttcaagtgggacggcgttcgcgtcctggccctgttcggcggcggt
ccgccggacctcttcgcgcgctccggagccgtggtcaccgccgcctacccggagatcgcc
gacctgcatctgccggagggcacgctcctcgacggcgagatggtggtcttcgacgcggcg
ggacggccgtcgttcaccgccctcgccgagcgcatgcacgtgcgggacaaggcacgggcc
gcccgactcgcggtgagcctgccggtgacgtacatgatctttgatttgctctttctcgac
gggatggatcacaccgggttgccctatctggcccgtcgggaacggctcgaggaacttggc
ctcgcggggccacgctggatggtgccgccctcgttcggcgacggcgccgcgaccgccgac
gccgcccgggagaaccacctcgaaggtgtcatggcgaagcgttccgactcggtctacctg
cccggacaccgctcgccggactgggtgaaggtcaagttcgaccggaccggggactacgtg
atcggtggctggcggccgggtgcccgcaaactgggcggcctgctgatcggcgtgccgacc
gccgacggcctggcatttcgcgggcgggtcggcggcggcatcggcgcggtcgccgagaag
gagctgctggcccggctcgagccactcgcctccggcgagtcgcccttcgcccccggcgcg
gtgccgagggaggattcgcgcggagcccattgggtacgcccggagttggtcgccgagatc
agatacggcaaccagacgcccgaccgtcgtctgcggttcccccggttcctgcggctgcgc
gacgacaagaccgccgcggagtgtgccgacgatgaagacgcctga
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