Actinoplanes missouriensis: AMIS_54500
Help
Entry
AMIS_54500 CDS
T01795
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ams
Actinoplanes missouriensis
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ams03021
]
AMIS_54500
Transcription machinery [BR:
ams03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMIS_54500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
HTH_10
MarR
DUF134
HTH_24
HTH_AraC
HTH_3
Sigma70_ECF
HTH_Tnp_4
HTH_31
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
BAL90670
UniProt:
I0HCD3
LinkDB
All DBs
Position
complement(5799583..5800350)
Genome browser
AA seq
255 aa
AA seq
DB search
MTVLDTAPTSAADRLAALAAVPAGDPARAALRDRAIEAWLPLARHLAHRYSGRGEPTDDL
IQTATVGLIKAVDKFDPERGVDFAGYAIPTIIGEIKRHFRDRTWSVRVPRRLQELRLAIT
EANSTLTHTLGRSPTVPDIAGHLGISEEDVLEGLEGARAYNATSLSTPISADGNTELGDT
LGCEDHEYEIAETRVALGPALAMLDEREQRILTLRFYGNLTQSQIADQVGISQMHVSRLL
TKALTKLRRQLDGEI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacagttctggacaccgcgccgaccagcgcggccgaccggctcgccgccctcgcggcc
gtgccggccggcgatccggcccgagcggctctgcgggaccgggccatcgaggcctggctt
ccgctcgcccgccatctcgcccatcggtactccggtcgcggcgagcccaccgacgacctg
atccagaccgcgaccgtcggcctgatcaaggcggtcgacaagttcgacccggagcgtggg
gtcgacttcgccggctacgcgatcccgacgatcatcggggagatcaagcggcacttccgg
gaccggacctggtccgtgcgggtgccgcgccggttgcaggagctgcggctggcgataacc
gaggcgaacagcacgctcacccacactctcggacgctcgccgaccgtgccggacatagcc
ggccatctcgggatcagcgaggaggacgtgctcgaagggctggagggcgcccgcgcctac
aacgccaccagcctgtccacgccgatctccgccgacgggaacaccgagctgggggacacc
ctcgggtgcgaggaccacgagtacgagatcgcggagacgcgggtcgcgctcgggccggcg
ctggcgatgcttgacgagcgggagcagcggatcctgacgctgcggttctacggcaatctc
acccagtcgcagatcgccgaccaggtggggatctcgcagatgcacgtgtcgcggttgctg
accaaggcgctgacgaagctgcggcgtcagctggacggcgagatctag
DBGET
integrated database retrieval system
