Amycolatopsis sp. BJA-103: BKN51_39715
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Entry
BKN51_39715 CDS
T05296
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amyb
Amycolatopsis sp. BJA-103
Pathway
amyb03420
Nucleotide excision repair
amyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BKN51_39715
03430 Mismatch repair
BKN51_39715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyb03400
]
BKN51_39715
Enzymes [BR:
amyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKN51_39715
DNA repair and recombination proteins [BR:
amyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKN51_39715
MMR (mismatch excision repair)
Other MMR factors
BKN51_39715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUI63688
UniProt:
A0A2N8MYJ1
LinkDB
All DBs
Position
8860656..8863928
Genome browser
AA seq
1090 aa
AA seq
DB search
MISELQRRQVEPAEIARALGLHSPTDEQAEVIAAPIEPSLVVAGAGAGKTETMAARVVWL
VANSIVPPERVLGLTFTRKAARQLGERVRTRLRRLVGSGLLDKIDPTGDLRTTVTAGEPT
VLTYHAYAGRLLSEHGLRLPVQPGVRLLSETSSWQFSHRVVSTWDNDLDTDRVPSTVTAQ
LLALAGELGEHLVETERLAQYTSWLCDVIEKAPRAKGQRAALPQKLAEVMTAQRFRLALL
PLVEAYHTRKRAEGALDFADQMSLAAQLADSYPAVVAGERERYGAVLLDEYQDTGHAQRI
LLRSLFGGVEHPPMPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRDNGERLVPALDFGL
LTSFRNPPEVLELANAISEPLRERGLGVARLRALEGAGTADIASALLPDVRAEREWVADA
VAKRWFETMEETGKPPTAAVLVRRRADMAPIAAEMRARGLPVEVVGLGGLLDEPEVADLV
STLRVLADPLAGSAAARLLTGARWRIAAADLAALWRRAGELSSPVPPSGKSDVDEPVLVT
ERVEQAGLADAIDDPGTAERYSTEGYRRIRRVGGELSALRRRLDQSLPELVADVERTMLL
DVESLARPGPAGRAHLDAFADVVTDFAETSPTATLLSFVDYLNTAAHAEDGLTPGEVEVV
PDRVQVLTVHSAKGLEWQIVAVPHLVKEVFPGRRRSSSWLRTSTALPAALRGDSEDLPEL
RVAEGYDRKEVQEALELHEEGFVAREADEERRLCYVALTRSERTLLVSGHWWNESSARPK
GPSEFLLEIGEVMRGNSVGRIEHWADEPESDGENPLVADSRKARWPVDPLWPRREGVTNG
VDMVLGAMEDTAGAEEGDAEEEEEEDPDGWISDTKVLLEERARAQNRVQQVVLPPHLSVS
QLVELSADPAALAKRLRRPLPVRPNTYARRGTAFHGWLEQRFGGEQLLEIDDLPGAADVD
EAPDSELEALQTAFEKSEWANRVPHAVEVPFSADVVGVTVRGRMDAVFADSDGGWTVVDW
KTGAVPEKDRLAPLAVQLAAYRLAWAALKKIPVEKVRAAFHYVKHDKTVSPADLLDAEGL
RNLLRSVPTI
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
ttgatctccgaactccagcgccgtcaggtcgaaccggccgagatcgcccgcgcgctcggc
ctgcacagcccgaccgacgaacaggccgaggtcatcgccgcccccatcgagccgtcgctg
gtggtcgcgggggccggggcgggcaagaccgagacgatggccgcgcgtgtggtgtggctg
gtggccaacagcatcgtgccgccggaacgcgtcctcggcctgaccttcacccgcaaggcc
gcccgtcagctcggtgaacgcgtccgcacccggctccggcggctggtcggctcgggcctg
ctcgacaagatcgacccgaccggcgacctgcgcacgacggtgaccgccggggaaccgacg
gtgctcacctatcacgcgtacgccgggcggctgctgtccgaacacggcctgcggctgccg
gtccagcccggggtgcggctcctttcggagacgtcctcctggcagttctcgcatcgcgtg
gtgtccacttgggacaatgatctcgacaccgatcgcgtgccctccacggtgacggcgcag
ctgctggcgctggccggggaactcggcgagcacctggtcgaaaccgaacggctggcgcag
tacacgtcctggctgtgcgatgtcatcgagaaagcgccacgggccaaagggcagcgtgcg
gcgttgccccaaaaactggccgaagtcatgacggcgcaacggttccggctcgcgctcctt
ccgctggtcgaggcgtaccacacgcggaagcgagcggaaggcgcgctcgacttcgccgat
cagatgtcgctggccgcgcagctcgccgacagctatccggcggtggtcgcgggggaacgt
gagcggtacggcgcggtcctgctcgacgagtaccaggacaccgggcacgcccagcggatc
ctgctgaggtcgctgttcggcggcgtcgaacatccgccgatgccggtgacggcggtgggt
gacccggcgcaggccatctacggctggcgtggggcgagcgcggcgaacctgccgcggttc
accacggacttcccgcgcgacaacggcgaacggctcgtcccggcgctggatttcgggctg
ttgaccagtttccgcaatccacccgaggtactggaactggccaacgcgatctcggaaccg
ttgcgggagcgaggcttgggcgtcgcgcggctgcgcgcgctggaaggcgccggaacggcc
gacatcgcctccgcgctgctgccggacgtccgtgccgaacgcgagtgggtggccgacgcg
gtggcgaaacgctggttcgaaaccatggaggagaccggaaaaccgccgacggccgcggta
ctggtgcgccgtcgcgcggacatggcgccgatcgcggccgagatgcgggctcgcgggctc
ccggtggaggtcgtcgggctcggcggccttctcgacgagcccgaggtcgcggacctggtc
agtacgttgcgggtgctcgccgatccgctcgcgggcagtgcggccgcgcggttgctgacc
ggcgcgcgctggcggatcgccgcggccgacctcgcggcgttgtggcgccgtgccggtgag
ctttcgtcgccggtgccgccttcgggaaagtccgacgtggatgaaccggtgctggtgacc
gaacgggtcgaacaggcgggactcgccgacgcgatcgacgatcccggtaccgcggaacgc
tattcgacggaaggctatcgccggatccgccgggtgggcggcgagctttcggcgttgcgc
cgccgtctcgaccagtcgttgcccgaactggtcgccgacgtggaacgcacgatgctgctc
gacgtcgaatcactggcccgccccgggcctgccggtcgtgcgcatctggacgctttcgcc
gacgtcgtcacggatttcgccgagacctcgccgacggccacccttttgtcctttgtggac
tacctgaacacggccgcgcacgccgaagacgggctcacccccggcgaggtggaggtcgtc
ccggaccgggtccaggtgctgaccgtgcattcggcgaaggggctggaatggcagatcgtc
gcggttccgcacctggtcaaggaggtcttcccgggcaggcgtcgttcgtcgtcctggctg
cggacgtcgaccgcgctcccggccgcgctgcgcggggactcggaggatctgccggagctg
cgggtcgccgaggggtatgaccgcaaggaagtccaggaagcgctggagctgcacgaagag
ggcttcgtcgcgcgggaggcggatgaggagcggcggctctgttatgtcgcgctgacccgc
tccgagcgcacgctgctggtttccggccactggtggaacgagagcagcgcgcggccgaag
gggccgtcggagttcctgctcgaaatcggcgaggtgatgcgggggaactcggtcggccgg
atcgagcactgggccgacgagccggagagcgacggggagaaccctctggtcgcggactcg
cgcaaggcgcggtggccggtcgatccgctgtggccgcggcgtgagggtgtcaccaacggg
gtcgacatggtgctcggtgccatggaagacactgcgggcgcggaagagggcgacgccgag
gaagaggaagaggaagatccggacggctggatctccgacaccaaggtgctgctggaagag
cgcgcgcgggcgcagaaccgcgtccagcaggtcgtgctgccgccgcatctttcggtgagt
cagctggtggagctgtcggccgatccggccgcgctggccaaacggctgcggcggccgctt
cccgtgcgccccaacacttacgcgcgccgggggacggcgttccacggctggctggagcag
cggttcggcggtgaacagctgctggagatcgacgatctgccgggtgcggcggacgtcgac
gaggcgcccgattccgagctggaggcgctgcagacggcgttcgagaagagcgagtgggcg
aaccgggtgccgcacgccgtcgaggtcccgttctcggccgacgtcgtcggcgtgacggtg
cgcgggcggatggacgccgtgttcgccgactccgacggcggctggaccgtcgtcgactgg
aagaccggcgccgtcccggagaaggaccggctcgcgccgctggcggtgcagctggcggcg
taccggctggcgtgggccgcgctgaagaagatccccgtggagaaggttcgggcggcgttc
cactacgtgaaacacgacaagaccgtcagcccggcggatctgctggacgccgaaggcctg
cgaaacctgctgcgaagcgtcccgacgatctag
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