Amycolatopsis sp. AA4: CU254_01120
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Entry
CU254_01120 CDS
T05278
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyc03021
]
CU254_01120
Transcription machinery [BR:
amyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CU254_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_38
HTH_48
DUF746
Motif
Other DBs
NCBI-ProteinID:
ATY16071
UniProt:
A0A2K8M610
LinkDB
All DBs
Position
complement(226156..226854)
Genome browser
AA seq
232 aa
AA seq
DB search
MTLSAAAHRGPVAMFADRVFGSSAAAVPLPKAESEPDAAEVAKAEAWELVRAAQAGDSSA
FGQLYDRYVDVVYRYALFRLGDRDLAEDVTSETFLRALRRITSVSYQGRDVGAWFVTIAR
NLILDHVKSSRFRLEVVTDEVAEPGGVPGGPVGPAAQAGPEQQAIAGATRAELLRCVAEL
GEDQRECIVLRFLQGLSVAETAQIMDRNEGAVKALQHRAVRRLAQLLPTGLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atcaccctgtccgccgccgcgcaccgcggtccggtcgcgatgttcgccgaccgcgtgttc
ggctcgtccgcggccgccgtgccgctgcccaaggccgaatccgaaccggacgccgccgag
gtcgcgaaggccgaggcgtgggagctggtgcgggccgcgcaggcgggcgactcctccgcg
ttcggccagctgtacgaccggtacgtcgacgtcgtctaccgctacgcgctcttccgcctc
ggcgaccgcgacctggccgaggacgtcaccagcgagaccttcctgcgcgcgctgcgccgg
atcacgtcggtcagctaccagggccgcgacgtcggcgcgtggttcgtcaccatcgcccgc
aacctgatcctcgaccacgtgaagtccagccggttccggctcgaggtcgtcaccgacgag
gtcgccgaaccgggcggcgtgcccggcggaccggtcggaccggccgcccaggccgggccc
gaacagcaggcgatcgcgggcgcgacccgggccgagctgctgcgctgcgtcgccgagctg
ggcgaggaccagcgcgaatgcattgtgctgcggttcctgcagggtctgtcggtcgcggag
accgcgcagatcatggaccgcaacgagggcgcggtgaaggcgctgcagcaccgggccgtc
cggcggctcgcgcagctgctgcccaccggcttgcgttga
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