Amycolatopsis sp. AA4: CU254_09465
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Entry
CU254_09465 CDS
T05278
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
amyc
Amycolatopsis sp. AA4
Pathway
amyc00900
Terpenoid backbone biosynthesis
amyc01100
Metabolic pathways
amyc01110
Biosynthesis of secondary metabolites
Module
amyc_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CU254_09465
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amyc01006
]
CU254_09465
Enzymes [BR:
amyc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CU254_09465
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CU254_09465
2.5.1.29 geranylgeranyl diphosphate synthase
CU254_09465
Prenyltransferases [BR:
amyc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CU254_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ATY10669
UniProt:
A0A2K8LQI5
LinkDB
All DBs
Position
complement(1974749..1975840)
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AA seq
363 aa
AA seq
DB search
MDAPGFDADLPAHVERALADFLGRAGSEILRTEPSVAAGIEALSGFVLGGGKRIRPTFAW
WGWRGAGGAASGPLAEGALQAVASLELIQACALIHDDLIDSSDSRRGRPTVHVAAEKLHA
GRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAPLPAETIAAARPAWRAMRTEVLAGQY
LDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGASLAGADEQLIATLLEFGGDVGVA
FQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLVALGLQLAAERGDHAAAKVIADAIGAA
DLAGATVDRVREALTSVGAVAAVERQIDELTASANAALDRAHLAEPAPSALAGLIRLATQ
RKF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcccggattcgacgccgacctgcccgcgcacgtggagcgtgcgctggccgat
ttcctcggccgggcggggagcgagatcctgcgcaccgagccgagcgtcgcggccgggatc
gaggcgctgtccgggttcgtgctgggcggcggcaagcggatccggccgacgttcgcctgg
tggggctggcgcggcgcgggcggcgcggcttccggtccgctcgccgagggcgcgctgcag
gcggtcgcgagcctggagctgatccaggcgtgcgcgctgatccacgacgacctcatcgac
tcctccgattcgcgccgcggcaggccgaccgtgcacgtggccgccgagaaactgcacgcc
ggacgcggctggctcggttcgccgtcggtgttcgggctggccagcgcggtgctggtgggc
gacctggcgctggcctgggccgacgacatgttcgccgaggccccgctgcccgcggagacg
atcgcggcggcccggccggcctggcgcgcgatgcgcaccgaggtgctcgccgggcagtac
ctcgacgtccgcacgcaggccgtcggcgacgcttcgcccgaggccgcgctgcggatcgac
cggctcaagaccgccgcgtacaccgtccagcggccgctgcacctcggcgcctcgctcgcc
ggggcggacgagcagctgatcgccaccctgctggagttcggcggcgacgtcggcgtggcg
ttccagctgcgcgacgacctgctcggcgtgttcggcgacccgtcggtgaccggcaagccc
gccggcgacgacctgcgcgagggcaagcgcaccctgctcgtggcgctcggcctgcagctg
gccgccgagcggggcgaccacgccgcggcgaaggtgatcgccgacgcgatcggggccgcc
gacctggccggcgccacggtggaccgggtgcgggaggcgctgacctcagtcggcgcggtc
gccgcggtggaacgccagatcgacgagctgactgcctccgcgaacgccgcgctcgaccgc
gcgcacctggccgagcccgccccgtcggcgctcgccgggctgatccggctggctacccag
cggaagttctga
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