Amycolatopsis sp. AA4: CU254_23625
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Entry
CU254_23625 CDS
T05278
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
amyc
Amycolatopsis sp. AA4
Brite
KEGG Orthology (KO) [BR:
amyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
amyc03012
]
CU254_23625 (selB)
Translation factors [BR:
amyc03012
]
Eukaryotic type
Elongation factors
CU254_23625 (selB)
Prokaryotic type
CU254_23625 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
GTP_EFTU_D2
MMR_HSR1
SelB-wing_2
FeoB_N
T2SSK
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ATY13094
UniProt:
A0A2K8LXE4
LinkDB
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Position
complement(5098984..5100738)
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AA seq
584 aa
AA seq
DB search
MRVIATAGHVDHGKSTLIRRLTGMEPDRWAEERRRGLTLDLGFAWTRLGGEEIAFVDVPG
HQRFVPNMLAGVGPVPAALFVVAADEGWMPQSAEHLAALDAFGVRHGLLAVTKSDRADPA
RATAAALEEIGATALGEVPAVSVSGATGEGLEELRAQLAKLASRLPPPDLDADVRLWIDR
AFTIKGAGTVVTGTLGGGTLRVGDELTLGANRVQIRGLQALGEPRESVSAVARVAVNVRG
VPKDSVGRGDVLLTPGAWRPATEFDVRLRGAPSGDLHRNLVLHFGSAAVPARVRPLGPDT
ARLVLASPLPLRTGDRGLLRDPGEHRIPAGFDVLDVRPPSLARRGAARARGEELAAWEPG
SDCLRREGFVRHEDFRALGLPEAGERIGGWHADPAHLSRLRAEVAEVVADWTREHPLAAG
IPVEALRQRLGLPDAELVPAILTGGLVREDGLVRKPGAGLTAKVEAALEVLEARFAEHPF
RAPEADELRELGLGKRELAAAVRVGRVRAIADGVVLGPDAPERAAEVLAALGEPFTVSRA
RQALDSTRRVMIPLLEHLDAAGLTEPLGDGTRRTCCARPENGLP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgatcgccaccgccggccacgtcgaccacgggaaatccacgctgatccggcgg
ctcaccggcatggaaccggaccgttgggccgaggagcgccgccgcggcctgaccctcgac
ctcggcttcgcctggacccggctgggcggcgaggaaatcgcgttcgtcgacgttcccggg
caccagcggttcgtgccgaacatgctggcgggcgtcggcccggtcccggccgcgttgttc
gtcgtggccgcggacgaggggtggatgccgcaatccgcggaacacctggcggcgctggac
gcgttcggggtccggcacggcctgctggcggtcaccaaatccgaccgtgccgaccccgcg
agagcgacggcggcggcgttggaggagatcggggcgaccgcgctcggcgaggtgcccgca
gtcagcgtcagcggggcgactggcgaagggctcgaagaactgcgggcgcagctggccaag
ctggccagccggttgccgccgccggacctggacgcggacgtccggctctggatcgaccgc
gcgttcacgatcaaaggcgctggcaccgtcgtcaccggcaccctgggcggcggcaccctg
cgcgtcggcgacgagttgacgctcggcgcgaaccgggtgcagatccgcgggttgcaggcg
ctcggcgaaccgcgcgaaagcgtgtccgcggtggctcgggtcgcggtgaacgtgcgcggc
gtgccgaaggattccgtggggcggggcgacgtcctgctgaccccgggggcgtggcgtccg
gcgaccgaattcgacgtccggttgcgcggcgcgccgtccggtgacctgcaccggaatctc
gtgctgcacttcgggtccgcggcggtgccggcccgggtccgcccgctcggaccggacacc
gcgcggctcgtgctggcgagcccgctgccgctccggacgggcgaccgggggctgctgcgc
gacccgggggagcaccggatcccggccggattcgacgtgctggacgtccggccgccgtcg
ctcgcgcgccgcggcgccgcccgagcccggggcgaagaactggccgcgtgggaacccggc
tcggactgcctccgccgcgagggtttcgtgcgccacgaggacttccgcgcgctcgggctg
ccggaggccggcgaacggatcggcggctggcacgccgacccggcccacctcagccggttg
cgcgcggaggtcgccgaggtggtcgcggactggactcgagaacatccgctggcggcggga
atccccgtcgaagcgctccggcagcggctcggcctgccggacgcggaactcgtcccggca
atcctcaccggcgggctggttcgcgaggacgggctcgtccgcaagcccggcgcgggcctg
accgccaaagtggaagccgctctcgaagtcctcgaagcgcgcttcgccgagcacccgttc
cgcgcgccggaagccgacgaactgcgcgaactcggtctggggaaacgggaattggccgcc
gccgtccgggtgggccgggtgcgggcgatcgccgacggagtggtgctgggcccggacgca
ccggagcgcgcggcggaggtgctggccgcgctcggcgagccgttcaccgtgtcgcgggcg
cggcaggcgctggacagcactcgccgcgtgatgatcccgctgctggagcacctcgacgcg
gccgggctcaccgaaccgctcggcgacgggacccgccggacgtgctgcgcgcgcccggag
aacggattaccgtga
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