Amycolatopsis sp. AA4: CU254_34580 Help Entry CU254_34580       CDS       T05278                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism amyc  Amycolatopsis sp. AA4 Pathway amyc03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:amyc00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CU254_34580  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amyc03400]     CU254_34580 Enzymes [BR:amyc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CU254_34580 DNA repair and recombination proteins [BR:amyc03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CU254_34580 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  ATY14958 UniProt:  A0A2K8M5H0 LinkDB All DBs Position complement(7496780..7497745) Genome browser AA seq 321 aa AA seqDB search MAKADEVREGVSLTNLDQELFVDAGVTKRDLVDYFDAVSDRLLPVLRDRPLSVMRVLRGQ DAFMQKNLPKYTPEWVPRAKLWAESSQRTVTYGLCNDRRTLLWFGNQRAVELHPALTRVE PVGQTDLIMDLDPPEGADFHVAVEAARLVRQALADAGLAGALKTSGSKGVHVFVPLVPGL SFEDVAAATRAVGARAERIDPQLATTAFIREDRHGKVFLDSTRAGGATVAAAYSPRIRPG APVSFPVRWADADHVKPADFTVKTAVGLLGSADPWAEELPEPQELPADLVAEGHTIPVAR VAAMHEGKRRARARRESGESE NT seq 966 nt NT seq  +upstreamnt  +downstreamnt atggccaaagcggatgaggtgcgcgaaggggtttccctgaccaacctcgaccaggagctg ttcgtcgacgccggggtgacgaaacgcgacctcgtcgactacttcgacgccgtgtcggac cggttgctgccggtgctgcgcgaccgtccgctgtcggtgatgcgggtgctgcgcgggcag gacgcgttcatgcagaagaacctgccgaagtacacgccggagtgggtgccgcgggcgaaa ctgtgggcggagagttcacagcggacagtcacctatggtctgtgcaacgaccgccggacg ctgctgtggttcggcaatcagcgcgcggtcgaactgcatcccgcgctgacccgggtggag ccggtcggccagaccgatctgatcatggacctcgacccgccggagggagcggacttccac gtcgcggtcgaggcggctcggctggtgcggcaggccttggccgacgccgggctcgccggt gcgttgaaaaccagcgggtccaagggcgtgcacgtgttcgtgccgctggttcccggtctg tcctttgaggacgtcgcggcggcgacccgggcggtcggcgcgcgggcggagcggatcgat ccgcagctggcgaccactgcgttcattcgggaagaccggcacggcaaggtctttctcgat tcgacccgcgcgggcggggcgaccgtggcggccgcgtacagcccgcggatccggccgggc gcgccggtgtcgttcccggtgcgctgggcggacgcggaccacgtcaaaccggcggatttc accgtgaagaccgcggtaggactgttgggcagcgcggatccgtgggcggaggaattgccg gaaccacaggaacttccggcggatctcgtggctgaggggcatacgatcccggtcgcccgg gtcgcggcgatgcacgagggcaaacgccgggcccgggcccgccgggaatcaggggagagc gagtaa

DBGET integrated database retrieval system