Amycolatopsis sp. YIM 10: YIM_01995
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Entry
YIM_01995 CDS
T06270
Symbol
oppF2
Name
(GenBank) Oligopeptide transport ATP-binding protein OppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_01995 (oppF2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_01995 (oppF2)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_01995 (oppF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_29
AAA_25
AAA_16
ATP-synt_ab
AAA
AAA_5
Zeta_toxin
AAA_18
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QFU85626
UniProt:
A0A5P9PBN1
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Position
396742..397863
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AA seq
373 aa
AA seq
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MTEAKNDVLVSVEGLKVHFPIKRGVVIDKTVGYVYAVDGVDLSIERGETYGLVGESGCGK
STLGRAMLRLTEPTEGSVVFDGTDVAKLKGENLRKMRRRMQMIFQDPLSSLDPRQSVESI
LVEGMRAHGLDKGKEQTATRLRELLDSVGLPESSLRKYPHEFSGGQRQRIGIARALAVEP
DLIVADEPVSALDVSVQAQVVNLMEELQDRLGLTYLVIAHDLAVVRHISDRIGVMYLGSL
VEEADSDALYEEPLHPYTRALLSAIPVPDPVVEDSREQILLAGDLPSPANPPTGCRFHTR
CPWKQETLCDTDRPQLRVLEGAAAGHRVACHWAEDIRDGRIQPHAVSAELVEVDPGVNPD
VPHVASVVEAMDV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgaagaacgacgtgctggtcagcgtcgagggcctgaaggtgcacttcccg
atcaagcgtggtgtggtgatcgacaagaccgtcggttacgtctacgcggtggacggggtc
gacctgtccatcgagcggggcgagacctacggcctggtcggcgagtccggctgcggcaag
tccaccctcgggcgggcgatgctgcggctgaccgagccgaccgagggctcggtggtcttc
gacggcaccgacgtggccaagctcaagggcgagaacctgcgcaagatgcgccggcggatg
cagatgatcttccaggatccgctgtccagcctggacccccgccagtcggtggagtcgatc
ctggtcgagggcatgcgcgcgcacgggctggacaagggcaaggagcagaccgcgacgcgg
ctgcgcgagctgctcgactcggtcgggctgccggagagttcgctgcggaagtacccgcac
gagttctcgggtggacagcgccagcgcatcggcatcgcgcgggcgctggcggtggagccg
gacctgatcgtggccgacgagccggtgtccgcgctcgacgtgtcggtgcaggcgcaggtg
gtcaacctgatggaggagctgcaggaccgcctcgggctgacctacctggtgatcgcgcac
gacctggccgtggtgcggcacatctccgaccggatcggcgtgatgtacctgggctcgctg
gtggaggaggccgactccgacgcgctgtacgaggagccgctgcacccgtacaccagggcg
ctgctctcggcgatcccggtgccggacccggtggtggaggacagccgcgagcagatcctg
ctcgccggcgacctgccctcgccggccaatccgccgaccggctgccgcttccacacgcgg
tgtccgtggaagcaggagacgctgtgcgacaccgaccgtccgcagctgcgcgtgctcgaa
ggcgcggcggccgggcaccgggtggcctgccattgggccgaagacattcgcgacggccgg
atccagccgcacgcggtgtcggcggaactggtcgaggtggacccgggcgtgaatcccgac
gtcccgcacgtggcctcggtcgtcgaggcgatggacgtctga
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