Amycolatopsis sp. YIM 10: YIM_05735
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Entry
YIM_05735 CDS
T06270
Symbol
rhsC1
Name
(GenBank) Putative deoxyribonuclease RhsC
Organism
amyy
Amycolatopsis sp. YIM 10
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
WXG100
PPE
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
QFU86365
UniProt:
A0A5P9PDV7
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All DBs
Position
1151793..1156271
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AA seq
1492 aa
AA seq
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MSNPLVAQAQSQTTGVTGIGIAESAVDLANGVSDGSWVEAGLGAVGVGLEVLSLVVDPIG
TLASYGVSWLIEHVQPLKEALDWLAGDPPVIQSFSETWANVAAEVNAIAGDLGNEVTNGT
AGWQGEGAEAYRGAAAEQADALAGAASLADGISAGVMIMGTVVAAVRELVRDLVAELVGK
LITWALEAAATLGFATPAIAVQATTAITKTISKISEFIRKLVKTIGNVSPKIRKIIDKLG
EIIEKLSKMLRKGGKPGSGTTPSGAKPSTTKTPDTTPNSPDSPDTTPSNTDTTPDGGPAK
PDSGSPSSPDSSKPDGSSRPDDPNTTKTPEKARECENDPIDVATGEMVLGQTDVELPGVL
SLVLRRTHVSSFRSGELFGRSWASTVDQRVEVDEQGVVYVTDDGMILVYPDPPVDRGALP
VAGPRWPLSRSDRGWVVRRPEERTELHFAAGGGGRSRLASIVDDNGNRVDIERDAAGRLT
GIRHSGGYRIAVSATERGLVTGFALSGPDETEVPLARFAYDDAERLVEVVNSSTTALRFE
YDHAGRITKWTDRNGEWYRYFYDQHGRCVANQGSGGFLNGTFSYDTENRVTRFTDALGHT
TTYRLNEARRVIARVDPLGRTSTREWDSHDRLVARTDPLGRTTRFDYDEQGNLVALTYPD
GSRSIAEYNEHGRPVTIVGPDGAARRARYDHAGNLVGATDVLGATTRFTYNDRGHLVAVR
DALGNQRTIRTDAAGLPVEVVDAAGGRTRYTRDQFGRIVELSDPAGGVHTFRWTVEGRLA
SRVRPDGARELWRYDAEGNRSEHVDALGQVTRWENTHFDLPASRVGPDGSRVDFEYDADL
RLVAVRAADGGTWRYDYDEAGNLVRETDFNGRVLTYRHDEAGQLVERRNGAGEVTTFRRD
ALGRVVESRRDGWVSTFAFDAAGRLVRAVNPESDVRFERDAAGRVLLESINGRAVRSEYD
ALGRRRVRMTPTGAVSRWDYDANHQPTSLVSGGHRMTFGHDPAGREIERLLDTGTILAQE
WDSRHRLTGQSLSTVSADGAAPASRARLLQQRRYHYRLDGQVAAIGDQLTGDRWFDLDPA
GRVTGVSGPGWTESYRYDGVGNIVEGSGDEPGARVHTGTLLTEAGGTRFRYDAQGRVVLR
QRKRLSRKPDTWHYEWDADDRLTAVLTPDGTRWSYSYDALGRRIAKRRWATDGSVAEVVE
FAWDGTRIVEQVSNGVRAASWNYRPGTFTPVSQVERVLTAAQEWVDDEFYSIVTDLVGSP
SELVTPEGDLVWRAHHTVWGAALGELASTASTPLRFPGQYHDAETGLHYNYFRYYDPEFS
RYYSQDPLGLRGGLNPHSYVANALTQFDPAGLSACEIEGLEGVSVNRSDNSYSLTHDESG
SGIIADLDDDGVLTLMIDRQDGAPFSGRQLFDAAMQHFGDRVNAIEGNWVYGDNLAAFNR
RTGEGGMSPEEAAAQTWTGRQAARHGFTNVGEVNATGEPGNYKPVSARFNRP
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccgctggtcgcgcaggcgcagtcgcagacgaccggggtgaccgggatcggg
atcgccgagtcggcggtcgatctggccaatggtgtgtcggatggttcgtgggtcgaggcc
ggtctgggtgcggtgggtgtcggcctcgaggtgctgtcgctggtggtcgacccgatcggc
acgctggcgtcgtatggcgtgtcctggctgatcgagcatgttcagccgctgaaggaggcc
ctggactggcttgccggagacccgccggtgatccagtcgttctccgagacctgggcgaac
gtggcggccgaggtcaacgcgatcgccggggatctcgggaacgaggtcaccaacggcacg
gcgggctggcagggcgagggcgccgaggcgtatcggggcgcggcggctgagcaggcggat
gcgctggcgggtgcggcgtcgctggcggatggcatttcggccggtgtgatgatcatgggg
acggtcgtcgccgcggtgcgtgagctggtgcgcgacctggtcgcggagttggtcggcaag
ctcatcacctgggctttggaggccgccgccaccctgggttttgccactccggcgatcgcg
gtgcaggccaccacggcgatcaccaagacgatcagcaagatcagcgagttcatccggaag
ctggtcaagacgatcgggaacgtctcgccgaagatccggaagatcatcgacaagctgggc
gagatcatcgagaagctgtcgaagatgctgcgcaagggcggtaaaccgggcagcggcacc
accccgtccggagcgaagccgagcaccaccaagaccccggacaccacgccgaactccccg
gacagtccggataccaccccgtccaacacggacaccacgccggacggcggtccggccaag
ccggacagcggttcgccgagcagtcctgattcgtccaaaccggacggttcgagtcggccc
gacgatccgaacaccaccaagacgccggagaaggcgcgagagtgcgagaacgatccgatc
gacgtcgcgaccggcgaaatggtgctgggacagaccgacgtggaactccccggggtgctg
agcctggtgctccggcggacgcacgtctcgtccttccggtcgggtgagctcttcggccgg
tcctgggcctccaccgtcgaccagcgcgtcgaggttgacgaacagggcgtcgtctacgtc
accgacgacggcatgatcctggtgtacccggacccgccggtggatcgcggcgcgctgccg
gtcgccgggcctcgctggccgctgtcgcgttccgaccggggctgggtcgtgcggcgcccc
gaagagcggacggaactgcacttcgcggcgggtggcggcggccggtcccggctcgcgtcc
atcgtggacgacaacggcaatcgcgtcgacatcgagcgggacgcggccggacggcttacc
ggcatccggcattccgggggttaccggatcgcggtctccgccaccgagcgcggtctggtg
accggcttcgcactcagcggaccggacgagaccgaagtgccgctcgcccggttcgcctac
gacgacgccgagcggctggtcgaggtagtcaactcgtccacgacggcgctgcggttcgag
tacgaccacgcgggccggatcacgaagtggaccgaccgcaacggcgagtggtaccgctac
ttctacgaccagcacggccgttgtgtggccaaccagggctctggtggcttcctgaacggg
accttcagctacgacaccgagaatcgggtcacccggttcaccgacgcgctcgggcacacc
acgacctaccggttgaacgaagcacgccgggtgatcgcgcgggtcgacccgctcgggcgc
acctcgaccagggaatgggacagccacgaccggctggtcgcgcgcaccgacccactcggc
cggaccactcggttcgactacgacgagcagggcaacctggtcgcgctcacctatccggac
ggcagccggtcgatcgccgagtacaacgagcacggcaggccggtcaccatcgtcgggccg
gacggcgcggcgcgccgggcccggtacgaccacgccgggaacttggtcggagcgacggac
gtgctgggcgcgaccaccaggttcacctacaacgaccgcggtcacctggtcgccgtccgc
gacgcgctcggcaaccagcggaccatccgcacggacgcggccggcctgccggtggaggtg
gtcgacgcggcgggcggacggaccaggtacacacgcgaccagttcggccgcatcgtcgag
ttgagcgatccggcgggcggggtgcacacgttccgctggacggtcgaaggcaggctggcc
agccgggtgcggcccgacggcgcccgtgaactgtggcggtacgacgcggagggcaaccgg
tccgagcacgtcgacgccctcggtcaggtcaccagatgggagaacacccatttcgacctg
cctgcgagccgggtcgggccggacggcagcagggtggacttcgagtacgacgcggacctg
cgcctggtcgcggtgcgcgccgccgacggcgggacctggcggtacgactacgacgaggcg
ggcaacctggtccgggagaccgacttcaacggccgggtgctgacctatcggcacgacgag
gccgggcagttggtcgaacggcgcaacggcgccggtgaggtgaccactttccggcgggac
gcgctcggcagagtggtcgagagccgtcgcgacggctgggtctccacgttcgccttcgac
gcggcgggcaggctcgtgcgtgcggtgaaccccgaatccgatgtccggttcgagcgggac
gccgccgggcgggtcctgctcgaatcgatcaacggccgggcggtgcgctcggagtacgac
gcgctgggcaggcgccgggtacggatgacaccgaccggcgcggtgagccggtgggactac
gacgcgaaccaccagccgacgagcctggtcagcggcgggcaccggatgacgttcggccac
gatccggccggtcgggagatcgagcgattgctcgacacgggcaccatcctggcccaggaa
tgggattcccggcaccggctcaccggtcagagcctgagcaccgtttcggcggacggggcc
gcgcccgcgagccgagcgcggctgctccagcagcggcggtaccactaccgcctcgacggc
caggtcgccgcgatcggcgaccagctgaccggagaccggtggttcgacctggacccggcc
ggccgggtcaccggtgtctccgggccggggtggaccgagtcctaccggtacgacggcgtt
ggcaacatcgtcgaaggcagcggggacgagccgggcgccagggtgcacaccggcaccctg
ctgaccgaggccggtggtacccgcttccgctacgacgcacagggacgggtggtgctccgc
cagcggaagcggctatcgcggaagcccgacacgtggcactacgagtgggacgccgacgac
cggctgacggccgtgctcaccccggacggcacccgctggagctacagctacgacgcgctc
ggcaggcggatcgccaagcggcgctgggcgacggacggatccgtcgccgaagtggtcgag
ttcgcctgggacggcacccggatcgtggagcaggtgtcgaacggcgtccgggccgcgagc
tggaactaccgccccggcaccttcaccccggtctcccaggtggagcgcgtgctgaccgcg
gcgcaggagtgggtggacgacgagttctactcgatcgtcacggatctggtcggcagtccg
agcgagctggtcacgccggagggcgatctcgtctggcgcgcgcaccacacggtgtggggt
gcggcgctgggggagctggcctccacggcgagcacgccgttgcgcttccccggtcagtac
cacgacgccgaaaccggcctgcactacaactacttccggtactacgacccggagttctcg
cggtactactcgcaggacccgctcggtctccgcggcgggctcaacccgcattcctatgtc
gccaacgcgctgacccagttcgatccggccgggctgagcgcctgtgagatcgaggggctc
gagggcgtctcggtcaatcggagcgacaacagttactccctcacccatgacgagagcggc
agcgggatcatcgccgacctggacgacgacggcgtgctcacactgatgatcgaccgccag
gacggtgcgccgttctccgggaggcaattgttcgacgccgcgatgcagcacttcggggac
cgggtcaacgccatcgaaggcaactgggtctacggcgacaacctcgccgcgttcaaccgg
cggaccggcgaaggcgggatgagcccggaggaggcggccgcgcagacgtggaccgggaga
caggcggctcggcacggcttcactaatgtcggcgaggtgaacgcgacgggcgagccgggc
aactacaaacccgtcagtgcgcggttcaatcgtccctga
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