Amycolatopsis sp. YIM 10: YIM_09890
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Entry
YIM_09890 CDS
T06270
Symbol
rhsC2
Name
(GenBank) Putative deoxyribonuclease RhsC
Organism
amyy
Amycolatopsis sp. YIM 10
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF4595
RHS
WXG100
T7SS_signal
YARHG
Motif
Other DBs
NCBI-ProteinID:
QFU87184
UniProt:
A0A5P9PGP9
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All DBs
Position
1983372..1988000
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AA seq
1542 aa
AA seq
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MANPLIAEVQDSTTAISGVPILESISETSKAIESGDWAAGVLGAAGTALDALGMAMDPFG
SILAAGVGWLIEHCGPLSDALDALTGNPDEIKAHSETWKNVGTELSSISADLAKMIEEDT
ASWLGPAGDAYRTRGADTATLIAGAQTAAEGASSGIATAGEVVGAVRSLVRDIIAELVGH
MISWALQVLFTLGIGLAWVVPQVVSAVAKTAMKIADITKKLVQALSKLSPLLKKLGDSFG
DAAKALKNIKGGNPPKPETTRGGGGDTTPSGAGPTPKPPPGQSNGGGGDSTTSSSAKPDG
SSGNPPPPSPRPDPTPTPNPTPTPTPTPTPPPPAPQPRGGGGNTPPANNSGSGPRDRAMP
DENKTCVTDPVDVATGEVLMTQIDLVLPGAVVDLELSRTHLSGYRAGRWFGPSWASTVDQ
RLELGREGIRFYAEDGMVLVYPVPAGAPVLPLEGPRYPLHATPEGYRLSAGERELYFAGT
GNVVPLTAIEQRGSRTEFRYGQDGAPAGLRRDDGTEIQFSAADGRVVALGAPGAAPLVRF
GYNRLRQLSAVADFEGRPMTLDYDFEHRLVGWQDRNGTWYRYVYDAAGRCVRTAGANGYY
NATFTYEPGTTRHTDATGNTWIYRLNEAGQLVERVDPLGGTRRYTWSRYDQLLSQVDEIG
REIRYEYENGELVAVIRPDGSVLAADAPVARSLPLPGATPSTGPAAAPDPMADEQATDAS
ARPGNRDLFGRPQVVHTASGGETRLGWTAQGRRAWRIGPHGDRQAWLHDAEGRVVEYRDA
AGGVRRRGYGPFGLVLEDIDTAGARTTYTYDGELRPTSVTNPQGLTWRYTYDAAGRLVEE
IDYDGRRLTYTYDAAGQLRRMTNGLGQPTEFDYDALGNVVARRTTEEITRYGYDELGHLV
FAENPESRLEIVRDGRGRIVTETINGLGVCWDYDDTSVRRLTSSGVDSEWAFGDTGLPRS
LRIGGHEVGFAYDEVDREIVRSVDGVVVLRRRFDAEDRLAEEEITGVGRRVYGYRPDGRL
AAVDDAARPWRLAFDQAGRVSEAHGPAGVERFTHDAAGRITSAATPVLPGQRTHRGNALV
SAGTTRYTGDAQGRVTGRYRTDPDGERSWTYTWDQLDRLRSARTPDGARWTYHYDPLGRR
FAKRRWITGANGEPELAGDTRFLWSGFDLVERVETDAAGATRILTWERHPGDSRPIVQIE
RSGSDDQGNFRAVITTPAGAPSELLDERGAVVWQDQGSFWGAAVPGAGPAAIPLAFPGQH
RDEETGLHYNVFRYYDPETARYLSQDPLGLAAAPDPVGYVGEPLLIGDPLGLVGSCGKTG
GPETPKRPRPDDFDQHPDLKPPPAKRTDLGIDVLRMTPEEFEKFKPRLDEMMNADKHFFW
SGGYKKHNPDGEDPYLGSIEFKANQVAKEHGGNTLEGLIADNKLKMPDWVPPSKMNDPNQ
GFWSHGDHGSSNLDQKKLVSEKWDHASETFAKNSKEDTHVVFPDKPGDKTSTGIDNPNGD
IYPYRRPDNIFDKIEYPKLEQNGIKVTEHNAETGATRPYRKP
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccgttgattgccgaggtccaggactcgaccacggcgatatccggggtaccg
atcctggagtcgatcagtgaaaccagcaaggcgatcgaaagcggtgactgggctgccggt
gtgctcggcgccgccgggaccgcgctggacgcgctcggcatggcgatggacccgttcggg
tcgatcctggccgccggggtcggctggctgatcgagcactgtggaccgctctcggacgcg
ctggacgcgctcacgggcaatccggacgagatcaaggcgcactcggagacgtggaagaac
gtcggcaccgagctgtcgtcgatcagcgcggacctggccaagatgatcgaagaggacacc
gcctcctggctcggtccggccggggacgcctaccgcacccggggtgccgacaccgcgacc
ttgatcgccggggcgcagaccgcggccgagggcgcgtccagcgggatcgcgaccgcgggt
gaggtggtcggcgcggtccggtcgctggtgcgcgacatcatcgccgagctggtcgggcac
atgatcagctgggcgttgcaggtgctgttcaccctgggcatcggcctggcctgggtggtg
ccgcaggtggtctccgcggtggccaagaccgcgatgaagatcgccgacatcaccaagaag
ctggtccaggcgctgagcaagctctcgccgctgctcaagaagctcggggactccttcggc
gacgccgccaaggcgctcaagaacatcaagggcggcaacccgccgaagccggagaccacg
cgcgggggcggcggcgacaccacgcccagcggcgccggacccacgcccaaaccgccgccc
gggcagagcaacggcggtggtggggactccaccaccagcagcagtgccaagccggacggc
tcgtcgggcaacccgccgccgccgtcgcccaggcccgaccccactccgacccccaacccg
acgcccacacctacaccgacgccgacaccgccgcccccggcaccgcagccgcgaggtggc
ggcggcaacaccccgcccgcgaacaactccggatcgggcccgcgcgaccgcgcgatgccg
gacgagaacaaaacgtgcgtgacggacccggtggacgtggcgaccggcgaggtcctgatg
acccagatcgacctcgtcctgcccggggcggtggtggatctggagttgtcgcgcacccac
ctgtcggggtaccgcgccggccggtggttcgggccgtcgtgggcgtccacagtggaccag
cggctggagctgggccgcgaggggatccggttctacgccgaggacggcatggtgctggtc
tacccggtcccggccggtgcgccggtgctgccactggagggcccgcgttatccgctgcac
gccacgccggaggggtaccggctgtcggcgggtgagcgcgagctgtacttcgccggtacc
gggaacgtcgtcccgctcaccgcgatcgagcagcggggcagccggaccgagttccggtac
ggccaggacggcgcgcccgccgggctccgccgcgacgacggcaccgagatccagttcagc
gccgccgacggccgggtggtcgcgctcggcgcaccgggggccgcgccgctggtgcggttc
ggctacaaccggctgaggcagctcagcgcggtggccgacttcgaaggccgcccgatgacg
ctggactacgacttcgagcaccggctcgtcggctggcaggaccgcaacggcacctggtac
cgctacgtctacgacgcggcaggccggtgcgtgcgcaccgccggggcgaacggctactac
aacgcgaccttcacctacgagcccggcaccacccggcacaccgacgccaccgggaacacc
tggatctaccggctcaacgaggccggtcagctggtcgagcgggtcgacccgctgggcggc
acccgccggtacacctggagccggtacgaccagctcctgtcccaagtggacgagatcggc
cgcgaaatccggtacgagtacgagaacggggaactggtcgcggtcatccggccggacggt
tcggtgctggccgcggacgccccggtggcccgctccctgccgctgcccggagccacgccg
tcgaccgggcccgccgccgcccccgatccgatggccgacgagcaggcgacggacgcctcg
gcgcgcccggggaaccgggacctgttcggcaggccccaggttgtgcacaccgcctccggt
ggcgagacccggctgggctggacggcacagggcaggcgcgcctggcgcatcggcccgcac
ggcgaccggcaggcctggctgcacgacgccgaaggccgggtggtcgagtaccgcgacgcg
gcgggcggggtccgacgccgtggttacgggccgttcggcctggtgctggaggacatcgac
accgcgggcgcgcgcacgacctacacctacgacggtgagctgcgcccgacctcggtgacg
aacccgcagggcctgacctggcgctacacctacgacgccgcgggcaggctggtcgaggag
atcgactacgacggccgtcgcctcacctacacctacgacgcggccgggcagctgcggcgc
atgaccaacggactcggccagccgaccgagttcgactacgacgcgctcggcaacgtcgtg
gcccggcgcaccaccgaagagatcacccgctacggctacgacgagctgggccacctggtc
ttcgccgagaaccccgagtcacgcctggagatcgtccgggacgggcgcggccggatcgtc
accgagacgatcaacgggctcggtgtctgctgggactacgacgacacgagcgtgcgccgc
ctgacctcgtccggtgtggacagtgagtgggccttcggcgacaccggtctgccccggtcg
ctgcggatcggcggccacgaggtcgggttcgcctacgacgaggtcgatcgcgagatcgtt
cgcagcgtggacggcgtggtggtgctgcggcggcggttcgacgccgaagaccggctggcc
gaggaggagatcaccggggtcgggcggcgcgtctacggctaccgtcccgacggcaggctc
gccgcggtcgacgacgccgcgcggccgtggcggctcgccttcgaccaggccggtcgcgtc
agcgaggcgcacggtccggccggggtcgaacggttcacccacgacgcggccggtcgcatc
acctcggccgccacgccggtcctgccggggcagcgcacccaccgcggcaacgcgctggtc
tcggcgggcaccacccgctacaccggcgacgcgcagggacgggtcaccgggcggtaccgc
accgatccggacggcgagcggtcctggacctacacctgggaccagctcgatcgcctgcgc
agcgcgcgcacgcccgacggcgcacgctggacctaccactacgacccgctgggcaggcgg
ttcgccaaacggcgctggatcaccggcgcgaacggcgagcccgaactcgccggggacacg
cggttcctgtggagcggtttcgacctggtggaacgggtggagaccgacgcggccggggcg
acccggatcctgacctgggaacgtcatcccggtgacagccgcccgatcgtgcagatcgag
cgctccggctccgacgaccagggcaacttccgcgccgtgatcaccacgccggccggcgcg
cccagcgaactgctcgacgagcggggcgcggtggtctggcaggaccagggcagcttctgg
ggcgcggcggtgccgggtgccgggcccgcggcgatcccgctggccttccccggtcagcac
cgcgacgaggaaaccgggctgcactacaacgtcttccgttactacgacccggaaaccgcg
cggtacctcagccaggacccgctcggcctggccgccgcacccgacccggtcggttacgtc
ggcgaaccactgctcatcggcgacccgctcggactggtgggttcctgcggcaagaccggc
ggaccggaaaccccgaaacgcccccggccggacgacttcgaccagcatcccgatctcaag
ccgccaccggcgaaacggaccgacctcggtatcgacgtgctgcgcatgacgccggaggag
ttcgagaagttcaagccgcggctggacgagatgatgaacgccgacaagcacttcttctgg
tccgggggctacaagaagcacaaccccgacggcgaggatccctatctcggctcgatcgag
ttcaaggcgaaccaggtcgccaaggaacacggcggcaacacgctcgaaggcctcatcgcc
gacaacaagctgaagatgcccgactgggtgccgccgtcgaagatgaacgacccgaaccag
ggtttctggtcgcacggcgaccacggcagctccaacctcgaccagaagaagctggtctcg
gagaagtgggaccacgcctcggagacgttcgcgaagaactccaaagaggacacccacgtg
gtgttccccgacaagccgggtgacaagaccagtaccgggatcgacaacccgaacggcgac
atctatccctaccgcaggccggacaacatcttcgacaagatcgagtacccgaagttggag
cagaacggcatcaaggtcaccgagcacaacgcggaaaccggcgcgacgcgcccgtaccgg
aaaccgtga
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