Amycolatopsis sp. YIM 10: YIM_15800
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Entry
YIM_15800 CDS
T06270
Symbol
rhsC3
Name
(GenBank) Putative deoxyribonuclease RhsC
Organism
amyy
Amycolatopsis sp. YIM 10
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF5110
WXG100
PPE
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
QFU88341
UniProt:
A0A5P9PJ52
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All DBs
Position
complement(3190528..3195000)
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AA seq
1490 aa
AA seq
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MPEGNPLVAQAQSQTTGVTGIGIAESAVDLANGVSDGSWVEAGLGAVGVGLEVLSMVVDP
IGTLASYGVSWLIEHVQPLKEALDWLAGDPPVIQSFSETWANVAAEVNAIAGDLGNEVTN
GTAGWQGEGAEAYRGAAAEQADALAGAASLADGISAGVMIMGTVVAAVRELVRDLVAELV
GKLITWALEAAATLGFATPAIAVQATTAITKTISKISDFIRKLVKTIGNVSPKIRKIIDK
LGEIIEKLSKMLRKGGKPGSGTTPSGAKPSTTKTPDTKPNSPDSPDTTPSSTDTTPGGTD
TPSSKPSDGTTPSSTKPDSSSRPDDPVKAGRDEGCKPGSGDPVDPATGDMFLSHTDVHIS
APLALVLRRSHVSSYRAGRSFGPTWASTVDQRLEFDEQGVVFAAPDGMLLVYPHPPADGA
EVLPVAGPRWPLARTETGYLIRQPQARQTLHFGPGQGAGSPIAAVVDENGTRIDFEYDST
GAPLAVKHSGGHRIDVVSDDGLVREYRLADQDGSSIELVRFGYDESRRLVEVVNSSQQPM
RFGYDLAGRITRWEDRNGQWYSYDYDGAGRVVATQGSGGALTGTWTYHDDGRTTDYTDGG
GHTTRFEFNEARQLVRETDPLGAVTTSEWDPFNRLLSRTDPLGRTYRYTYGETGELATIT
RPDGSRELSEFDAHGRRTTVVDADGAVWHYSYDERGNRTEVLDPSGARTSYHYDERGHLH
RVVDPLGGVVTVETDAAGRPVAVTDRQGGTTRYQRDQFGRVTTITDPLGARTELRWTVEG
RLASRTTPDGATEQWSYDAEGNQVAHTDPLGAVTVVETTHFDLPAAETGPDGTRLEFSYD
TELRLTGVRNAQGLHWQYTYDPAGNLVAETDFDGREIRYAYDAAGQLVERTNGLGQTTRF
VRDALGNVLERHTEGQVARFAYDPAERLIRAVNDDADVIFERDALGRVLRETVNGRTLES
AYDAAGRRTYRRTPSGAESHWSFDADHQATGLRTAGRTLSFGLDPAGREIERLLDTGTVL
AQRFDGADRLIEQTVSAVDPATRTTSMLQQRRYHYRADGYVDAIEDHLTGVRQFDLDHAG
RVTAVRGAGWAERYAYDAAGNITQAATSDPADTAQGTREYSGTRLSHADGVHYTYDAQGR
VIRRQRKRLSRKPDNWHFDWTAEDRLAGVVTPDGTRWRYRYDALGRRIAKQRLAPDGQSV
AEQLDFVWDDGVLAEQVHNGVHATTWNYQQATITPITQAERVRTADQDWVDAQFYSIVTD
LIGTPTELVDAHGRLVWQARRTLWGAPRDSEPAGVVMPLRFPGQYHDAETGLHYNFFRFY
DPDTARYTSADPLGLAPAPNPATYVHNPIGWMDPLGLTATPGGCGTGSRNVVYRNLRPDE
DHTKGLVAKNPDATYKPGGHITSGSRPNFRSQYISTTTDIEVAKKWNNGRLVEIDLDKFD
GTVIDASTQAARDAAGIRGATANRLAESSKEVLLVGHVPPEAIRWIGTPP
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggggaatccgctggtcgcgcaggcgcagtcgcagaccaccggggtgaccggg
atcgggatcgccgagtccgcggtcgacctggccaacggcgtgtccgacggctcctgggtc
gaagccggactcggcgcggtcggcgtcggactcgaagtcctctcaatggtcgtcgacccc
atcggcacactcgcttcctacggtgtctcgtggctgatcgagcacgtgcagccgctcaag
gaggcactcgactggctggccggggacccgccggtgatccagtcgttctccgagacctgg
gccaacgtcgccgccgaggtcaacgccatcgccggcgacctgggcaatgaggtcaccaac
ggcaccgccggctggcagggcgagggtgccgaggcgtatcggggcgcggcggctgagcag
gcggatgcactggcgggtgcggcgtcgctggccgacggcatctccgccggcgtgatgatc
atgggcaccgtcgtcgccgcggtacgcgaactggtccgcgacctggtcgccgaactggtc
ggcaagctcatcacctgggcgctggaagccgccgccaccctcggcttcgccacccccgcg
atcgccgtacaggccaccaccgccatcaccaaaaccatcagcaagatcagcgacttcatc
cgcaaactggtcaagaccatcggcaacgtctccccgaagatccgcaagatcatcgacaaa
ctcggcgagatcatcgaaaagctgtccaaaatgctccgcaaaggcggcaaacccggcagc
ggcaccaccccctccggcgccaagcccagcaccaccaaaaccccggacaccaagccgaat
tcgccggacagcccggacaccacaccgtcgagcaccgacaccacaccgggtggcacggac
acgcccagctcgaagccttcggacggcacgacgcccagttcgaccaagcccgacagctcc
agccgtcctgatgatccggtcaaagcgggccgggacgaggggtgcaagcccggctccggc
gacccggtcgacccggccaccggggacatgttcctgtcccacaccgacgtgcacatcagc
gcgccgctggccctggtgctgcggcgaagccacgtctcctcctaccgcgccggccgctcg
ttcggcccgacctgggcgtccactgtggaccagcggctggagttcgacgaacagggcgtg
gtgttcgccgcgcccgacggcatgctgctggtctacccgcacccgcccgccgatggcgct
gaggtgctgccggtcgccgggccgcggtggccgctggcgcgcaccgagacgggctacctg
atccggcagccgcaagcgcgccaaaccctgcacttcggacccgggcagggtgccggatcc
ccgatcgcggcggtggtcgacgagaacggcacccggatcgacttcgagtacgacagcacc
ggtgcaccactggccgtgaagcactcgggcggacaccggatcgacgtggtcagcgacgac
ggcctggtgcgcgagtaccggctggccgaccaggacgggtcctcgatcgaactggtccga
ttcggctacgacgagtcccggcgcctggtcgaggtggtcaactcctcacagcagccgatg
cggttcggctacgacctcgccgggcgcatcacgcgctgggaggaccgcaacggccagtgg
tacagctacgactacgacggcgccggacgagtcgtcgccacccagggctccggcggcgcc
ctgaccggcacctggacctaccacgacgacggccggaccaccgactacaccgacggcggc
gggcacaccacccggttcgagttcaacgaggcccgccagctggtgcgggaaaccgatccg
ctcggcgcggtcaccacctcggagtgggacccgttcaaccggctgctctcccgcaccgac
ccgctcggccggacctaccgctacacctacggcgagaccggcgagctggccaccatcacc
cgccccgacggctcccgggaactgtccgagttcgacgcgcacggccgccgcaccaccgtg
gtcgacgccgacggcgcggtgtggcactacagctacgacgaacgcggcaaccgcaccgaa
gtgctggacccgtccggtgcccggaccagctaccactacgacgagcgcggccacctgcac
cgggtcgtcgatccgctcggcggagtggtcacggtggagaccgacgccgcgggccgtccg
gtggccgtcaccgaccgccagggcggcacgacccgctaccagcgcgaccagttcggccgg
gtcaccacgatcaccgatccgctcggtgcgcggaccgagctgcgctggaccgtcgaaggc
aggctcgcctcccgcaccacgcccgacggcgccaccgagcagtggagctacgacgccgag
ggcaaccaggtcgcccacaccgacccgctcggcgcggtcaccgtggtcgagaccacccac
ttcgacctgcccgccgcggagaccgggccggacgggacgcggctggagttcagctacgac
accgagctgcggctgaccggcgtccgcaacgcccagggcctgcactggcagtacacctac
gaccccgccgggaacctggtcgccgagaccgacttcgacggccgcgagatccgctacgcc
tacgacgcggccgggcagctggtcgagcgcaccaacggactcggccagaccacccggttc
gtccgcgacgcgctgggcaacgtgctcgaacgccacaccgagggccaggtcgcccggttc
gcctacgacccggccgaacggctgatccgcgcggtcaacgacgacgccgacgtgatcttc
gagcgcgacgcgctgggccgggtgctacgcgagaccgtcaacggccgcaccctggaatcc
gcctacgacgcggccgggcgccgcacctaccggcgcaccccgtccggcgcggagagccac
tggtccttcgacgccgaccaccaggccaccgggctgcgcaccgccgggcgcacgctcagc
ttcgggctcgaccccgccggccgggagatcgagcggttgctcgacaccggaaccgtgctg
gcacagcgcttcgacggcgccgaccgcctcatcgagcagaccgtgtccgcggtcgacccg
gccacccgcaccacttcgatgctgcagcagcggcgctaccactaccgcgccgacggctac
gtcgacgccatcgaggaccacctgaccggcgtgcggcagttcgacctcgaccacgccggg
cgggtcaccgcggtgcgcggcgcgggctgggccgagcgctacgcctacgacgccgcgggc
aacatcacccaggccgccacctccgaccccgccgacaccgcgcagggcacgcgtgaatac
tccgggaccaggctcagccacgccgacggcgtgcactacacctacgacgcacagggccgg
gtcatccggcgccagcgcaagcgcctgtcccgcaaaccggacaactggcacttcgactgg
accgccgaagaccgcctcgccggcgtcgtcacccccgacggcacccggtggcgctaccgc
tacgacgcgctcgggcgccgcatcgccaagcagcgcctggccccggacgggcagtccgtg
gccgagcagctcgacttcgtctgggacgacggagtgctcgccgagcaggtccacaacggc
gtgcacgccaccacctggaactaccagcaggccacgatcaccccgatcacccaggccgaa
cgcgtgcgcaccgccgaccaggactgggtcgacgcccagttctactccatcgtcaccgac
ctgatcggcaccccgaccgaactcgtcgacgcccacggccgcctcgtctggcaggcccgc
cgaactttgtggggcgcaccgcgcgacagcgaacccgccggggtggtcatgccgctccgc
ttccccggccagtaccacgacgccgaaaccggcctgcactacaacttcttccggttctac
gaccccgacaccgcccgctacaccagcgccgaccccctcggcctcgcacccgcgccgaac
ccggcgacctacgtgcacaacccgatcggctggatggacccgctcgggctgaccgccacc
cccggcggctgcggcacgggttcacgcaacgtggtctaccgcaacctgcgccccgacgag
gaccacaccaagggcctggtggccaagaaccccgacgcgacctacaagcccggcgggcac
atcaccagcggcagccgcccgaacttccgttcccagtacatctccaccaccaccgacatc
gaggtggccaagaagtggaacaacgggcggctggtcgaaatcgacctggacaagttcgac
ggtacggtgatcgacgcctccacccaggccgcccgcgacgcggccgggatccggggcgcg
acggccaaccgcctcgccgaaagctcgaaggaagtcctcctcgtcggccacgtgccgccg
gaggcgatcagatggattggaaccccaccgtga
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