Amycolatopsis sp. YIM 10: YIM_16530
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Entry
YIM_16530 CDS
T06270
Symbol
oppD4
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_16530 (oppD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_16530 (oppD4)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_16530 (oppD4)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
TniB
AAA_22
Mg_chelatase
NACHT
Motif
Other DBs
NCBI-ProteinID:
QFU88486
UniProt:
A0A5P9PJK0
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Position
3352527..3353552
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AA seq
341 aa
AA seq
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MNAAAPTRSGSDTEAGAVALEVDRLSVDLRTPAGTVRAVDQVSFSVRRGRTLALLGESGC
GKSITAQTIVGLLDPIAEVAGGSVRVAGTDVLKLGRTERRRLAGPVLSIVFQDALAAMNP
VQPVGRQLGEPFRIHQGLSRRAAREKAIELMELVGIPEPRARARSFPHQFSGGMRQRLLI
AMAVALGPQVLIADEPTTALDVTVQAQVMRLLRDLRTEREMALVLITHDLAVVAEQADDV
AIMYAGNVVETGPVREVFADPKHPYTRGLLDSVPEHGVRGRPLHAVPGSPPELSAVPSGC
VFQARCPKAADLCAEERPRLTPADGTRSAACYFPEQERTNA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcagctcccaccaggtccggttcggacaccgaggccggggcggtggcactg
gaggtcgaccggctcagcgtggacctccgcaccccggcgggcaccgtccgcgcggtcgac
caggtctcgttttccgtgcgccggggccggacgctggcgctgctcggtgagtccggctgc
ggcaagtcgatcaccgcgcagaccatcgtcggcctgctcgacccgatcgccgaggtggcc
ggcggctcggtccgggtggccggtaccgacgtgctgaagctcggccgcaccgaacgccgc
cggctggccggtccggtgctctccatcgtcttccaggacgcgctggccgcgatgaacccg
gtgcagccggtcggcaggcagctcggcgagccgttccgcatccaccagggactgtcccgg
cgcgcggcgcgggagaaggccatcgaactgatggagctggtcggcatcccggaaccgcgg
gcgagggcccggtccttcccgcaccagttctccggcggcatgcggcagcgactgctgatc
gcgatggccgtcgcgctcggcccgcaggtgctgatcgccgacgagccgaccaccgcgctc
gacgtgaccgtgcaggcgcaggtgatgcgcttgctgcgcgacctgcggaccgagcgtgag
atggcgctggtgctgatcacgcacgacctggcggtggtcgccgagcaggcggacgacgtc
gcgatcatgtacgccgggaacgtggtcgaaaccgggccggtgcgcgaggtcttcgccgac
ccgaagcacccctacacccgcggtctgctcgattcggtgcccgagcacggggtgcggggc
cggccgctgcacgccgtgccgggcagtccgccggaactcagcgcggtgccgtccggctgt
gttttccaggcgcggtgcccgaaagccgccgacctgtgcgccgaagagcgcccgcggctg
actccggcggacgggacccggtcggccgcctgctacttcccggaacaggagcgcaccaat
gcctga
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