Amycolatopsis sp. YIM 10: YIM_17115
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Entry
YIM_17115 CDS
T06270
Symbol
oppD6
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_17115 (oppD6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_17115 (oppD6)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_17115 (oppD6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_22
AAA_16
AAA_29
AAA_25
AAA_33
SMC_N
Mg_chelatase
AAA_5
CbiA
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFU88603
UniProt:
A0A5P9PKC7
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Position
complement(3480103..3480906)
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AA seq
267 aa
AA seq
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MSRLVDLEDFQIELVTDRGVVRAVDGISLHVDPGETVTLIGESGSGKSTTAMGLLRLLPP
DLAVLSGKALLAGHDVVADPAAVTGLRGRVAGLIPQDPMTALSPVQTIGRRLAELVRLRH
GGSRREARVKARELLEQVHVPDPERLLDRYPHQLSGGLQQRVLIACALAGEPSLLVADEP
TSALDVTVQAGVLDLLMELQERTGVAILMITHDLGVARLVSDRVHVMREGRFVESGEVEQ
VVHAPVHPYPKQLLAAVPRLAPKEVRA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggctggtggatctcgaggactttcagatcgaactggtcaccgaccgcggggtg
gtccgcgcggtggacgggatctcgctgcacgtcgatcccggggagacggtgacgctgatc
ggcgagtccggctcgggcaagtcgaccacggcgatgggcctgctgcgattgctgccgccg
gacctggccgtgctgtccggcaaggcgctgctggccgggcacgacgtggtggccgatccg
gcggcggtgaccggcctgcgcggccgggtcgccgggctgatcccgcaggacccgatgacc
gcgctgagcccggtgcagacgatcgggcgcaggctcgccgaactggtgcgcctgcggcac
ggcggcagccgccgcgaagcccgcgtgaaggcacgggaactgctggaacaggtccacgta
cccgatccggaacggctgctcgaccgctacccgcaccagctctccggcgggttgcagcaa
cgcgtgctgatcgcctgcgcgctggcgggcgaaccctcgctgctggtcgccgacgagccg
accagcgcgctcgacgtgaccgtgcaggcgggcgtgctggacctgctgatggaactgcag
gagcggaccggggtggcgatcctgatgatcacccacgacctcggcgtggcgcgcctggtg
tccgaccgggtgcacgtgatgcgcgaggggcggttcgtcgaaagcggcgaggtcgaacag
gtcgtgcacgcgccggtccacccgtacccgaagcagttgctggcggccgtgccgcggctc
gccccgaaggaggtgcgggcgtga
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