Amycolatopsis sp. YIM 10: YIM_18505
Help
Entry
YIM_18505 CDS
T06270
Symbol
liaR12
Name
(GenBank) Transcriptional regulatory protein LiaR
Organism
amyy
Amycolatopsis sp. YIM 10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
GerE
AAA_22
HTH_23
AAA_30
HTH_38
BrxC_BrxD
TPR_10
Sigma70_r4_2
MobB
IstB_IS21
HTH_40
cobW
AAA
NB-ARC
TPR_16
Motif
Other DBs
NCBI-ProteinID:
QFU88881
UniProt:
A0A5P9PKQ6
LinkDB
All DBs
Position
complement(3794133..3796979)
Genome browser
AA seq
948 aa
AA seq
DB search
MEGSTPHVPRLRGRAGQLRAIGCHLDAVAGGRPGILNLSGPAGSGKTALLTAATAEASAR
GFRVLTARSAKLERDFVFGVVRQLLESTVFEAPAADRERLVGGPAAFAVEVLESGPSATA
VDLHSTFHSLWHLSRFLAEGSPLLLVIDDVHFADSLSIQWLDYVSRRLSGQRIGILTAGT
AGPGPFGKAPGVTGARQLEVGGLDAAAITEIVTDTLGENVSPEFVRTCHTVTAGNPALLE
GLLRSCHGAGGERLDPSRFGPRELATTVYHRLEQEDTALVALAQAIAALEGTDTDLELAA
AVAGLPASATFWAARRLREMSLLTDSADSAGGAGVDGAEGGALTFTERGIQAAIACRLTP
QDLHTAHAKAARFLNGVHAPCARVAAHLQETRQVGQDWAVHTLLSAAREAIADGDPTTAV
AHLRRVLHEPLTPEQRNEVLFELGSAEIHADPPAAVHHLSMVESESADPRRQAAIAALLA
GALSECDRFRESLNVLQHAVDRLDPDHPELASELETEILYLSRHDPHTATTVPQRLANLR
RRNSSTPQARRRLNAFVAEHGAVALDHMSAAALRRLALDSTPPGPLNDLGELRAFGAVVG
ALSNLEEYDLALQICEEVLDDRRRSLPLATGLASAYCADIRYQIGQLTAARSDAQAARDR
LESFEIRRGIIPALLDGTEMRLAAVQHDTEAAERLLARHRHIAKSTYLRTCMALHGRGLL
HASMGNHTAALNDQLDCGRRLERFGFVDHPQLPWRVPAALAQFQLGNHEEAILLAKTQLA
FARKRGLPRTLGIALHTAATVTEDARSIDLLTEAVEVLGRSQAKLEFAQAQAELAVRLGG
SGGHEQAATMLNQAMSTATSCGAIALAGRIHQQLHSPAAAQPQVLTRREHNIATLAAQGK
SNPEIAQALVLSRRTIEFHLTNIYRKLGISRRNQLTQSLVGSTTPTAF
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtggagggttccaccccacacgtaccgcggcttcgcgggcgcgccgggcagttgcgcgcg
atcggctgccatctcgacgcggtggccggtggccgccccggcatcctcaacctgagcggg
ccggccggttcgggcaagaccgccctgctcaccgcggccaccgccgaagcgagcgcccgt
ggtttccgcgtgctcaccgcccgctccgccaagctggagcgcgacttcgtcttcggtgtg
gtccgccagctgctggagagcacggtgttcgaggcacccgccgcggaccgcgagcggctg
gtcggcgggcccgccgcgttcgccgtcgaagtgctggagtccgggccctcggccaccgcg
gtggacctgcactccaccttccactccctgtggcacctgtcgcggttcctcgccgaggga
tctccgctgctgctggtgatcgacgacgtgcacttcgccgactcgctgtccatccagtgg
ctcgactacgtctcgcgccgcctgtccgggcagcgcatcggcattctcaccgccggcacc
gccgggcccggcccgttcggcaaggcacccggggtgaccggggcgcggcagctggaagtc
ggcgggctcgacgccgccgcgatcaccgagatcgtcaccgacaccctcggcgagaacgtc
tcccccgagttcgtccgcacctgccacaccgtgaccgcgggcaatcccgccctgctcgaa
ggcctgctgcggtcgtgccacggggccggcggcgagcggctggacccgtcccggttcggc
ccgcgcgagctggccaccaccgtctaccaccggctggagcaggaggacaccgcgctggtc
gcgctggcgcaggcgatcgccgcgctggaaggcaccgacaccgatctcgaactggcggcg
gcggtggccgggctgcccgcgtcggccaccttctgggccgcgcggcggttgcgtgagatg
agcctgctcaccgacagtgcggacagcgccgggggtgccggagtcgatggcgccgaaggc
ggggcgctgaccttcaccgaacgcggcatccaggccgcgatcgcctgccgcctgaccccg
caggacctgcacaccgcgcacgccaaggcggcgcgcttcctcaacggggtgcacgcgccc
tgcgccagggtcgccgcgcacctgcaggaaacccggcaggtcggccaggactgggcggtg
cacacactgctcagcgccgcccgtgaggccatcgccgacggcgacccgaccaccgcggtg
gcgcacctgcggcgggtgctgcacgaaccgctcacgcccgagcagcgcaacgaggtgctc
ttcgaactgggttcggcggagatccacgccgatccgcccgcggccgtgcaccatctgtcc
atggtggagtccgagagcgccgatccccggcgccaggcggcgatcgccgcactgctggcg
ggcgcactgtccgaatgcgacaggttccgcgagtcgctgaacgtgctgcagcacgcggtc
gaccggctcgacccggaccacccggaactggcttcggaactggaaaccgagatcctctac
ctctcgcggcacgatccccacacggctacgaccgtgccgcagcggctggcgaacctgagg
cgccgcaacagttccaccccgcaggcgcggcggcggctcaacgccttcgtggccgagcac
ggcgcggtggcactggaccacatgtccgccgcggcactgcgccggctggcactcgactcg
acgccgcccggcccgctgaacgacctcggcgagctgcgcgcgttcggcgcggtcgtcggc
gcactgtccaatttggaggaatacgacctcgcgctgcagatctgcgaggaggtgctggac
gaccgcaggcgcagcctgccgctggcgaccgggctggcaagcgcgtactgcgccgacatc
cggtaccagatcggccagctcaccgccgcccgctccgacgcgcaggccgcgcgcgaccgg
ctggagtccttcgagatccgccgcggcatcatcccggcactgctcgacggcacggagatg
cggctggccgcggtgcagcacgacaccgaggccgccgagcggttgctggcgcggcaccgg
cacatcgccaagtcgacctatctgcgcacctgcatggctttgcacgggcgcggcctgctg
cacgcgtcgatgggcaaccacaccgccgcgctgaacgaccagctcgactgcgggcggcgg
ctggagcggttcggcttcgtcgaccacccgcaactcccgtggcgtgttccggcggcgctg
gcgcagttccagctgggcaaccacgaagaggcgatcctgctggcgaagacgcagctcgcg
ttcgccaggaagcgcggcctgccgcgaacgctcggcatcgcactgcacaccgcggcgacc
gtcaccgaggacgcgcgctcgatcgacctgctgaccgaggccgtcgaggtgctgggccgc
tcgcaggcgaagctcgagttcgcgcaggcgcaggcggaactggcggtgcggctgggcggc
agcggcggccacgagcaggcggccaccatgctgaaccaggccatgtccaccgccaccagc
tgcggcgcgatcgccctggccgggcggatccaccagcagctgcactccccggccgcggcc
cagccccaggtgctcacccggcgcgagcacaacatcgccacgctcgccgcgcagggcaag
tccaacccggagatcgcgcaggcactggtgctgtcccgccgcaccatcgagttccacctg
accaacatctaccgcaagctcggcatctcccgccggaaccagctgacccagtccctggtc
ggctccaccaccccgaccgcgttctag
DBGET
integrated database retrieval system
