Amycolatopsis sp. YIM 10: YIM_20300
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Entry
YIM_20300 CDS
T06270
Symbol
oppD7
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_20300 (oppD7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_20300 (oppD7)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_20300 (oppD7)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_1
oligo_HPY
AAA_21
OppC_N
SMC_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFU89239
UniProt:
A0A5P9PLM5
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All DBs
Position
complement(4172293..4174230)
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AA seq
645 aa
AA seq
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MNGARRLGAASWIAAGVLGALVLVALFGDLFTTHDPNALSTDAGGPSGGHWFGTDQSGRD
IFSRLVAGTRWSLAIGLGATALALVAGTLIGSLAATAGRRADAVIMRVLDVIMAFPGIAL
AAVLVAVFGQGIGVLILAIAFVNMPPIARVVRANVLAQYSEDYVDAEKIIGAKRRFILAR
HVAVNCAAPVLVFCTVMVAEAIVFEASLSFIGAGIQPPDPSWGSVISDGKDLVLIGGWWA
TLFPGLMILLTVLALNVLSEGISDAWAAPSARSAKAGQAAKEVAAEEAAENTEPVLPISG
LREVGTRLSRTARDLDGKPPVLEVDSLAISFPDRHNGVDVVAGVSFSVRAGEVLGLIGES
GCGKSLTSLSIMGLQPRTAKVSGQIRFAQRDLLALSPAERRRHLGHDISMIYQDALSSLN
PAMTIHAQLKQFTRRGGTRTPAELLELVNLDPQRTLKAYPHELSGGQRQRVLIAMALSRS
PKLIVADEPTTALDVTVQAQVIALLLRLQEELGFALILVSHDLALVSDVADRVVVMYGGQ
VAETGTTARVVGAPRHHYTRGLLSAVLSLEESQAQLTQIKGVVPSPAEFGQGCRFADRCP
AARARCRTEAPVPAGQTLEHQVACHFPAEIDEVHAVHWIAEGARS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgcgcggcggctgggagccgcttcgtggatcgccgccggggtgctgggcgcg
ctggtgctcgtcgcgctcttcggcgacctgttcaccacgcacgacccgaacgcgctgagc
accgacgccggcgggcccagcggcgggcactggttcggcaccgaccagtccggccgggac
atcttctcccggctggtcgcgggtacgcgctggtcactggcgatcggcctgggcgcgacc
gcgctcgcactggtcgccggcaccctgatcggctcgctcgcggccaccgccggccgccgc
gccgacgcggtgatcatgcgcgtcctcgacgtgatcatggcgttccccggcatcgcgctg
gccgccgtgctggtcgcggtgttcggccagggcatcggcgtgctgatcctggcgatcgcc
ttcgtgaacatgccgccgatcgcgcgggtggtgcgggcgaacgtgctggcgcagtacagc
gaggactacgtcgacgcggagaagatcatcggcgcgaaacgccggttcatcctggccagg
cacgtcgcggtcaactgcgcggcgccggtgctggtgttctgcacggtgatggtggccgag
gcgatcgtgttcgaggcctcgctgtcgttcatcggcgcgggcatccagccgccggatccg
tcgtggggctcggtgatctccgacggcaaggacctggtgctgatcggcggctggtgggcg
accctcttcccggggctgatgatcctgctcaccgtgctcgcgctgaacgtgctctccgag
ggcatttccgacgcgtgggcggcaccttcggcccgcagcgccaaggcggggcaggcggcc
aaggaggtcgccgccgaggaagccgcggagaacaccgaaccggtgctgcccatctcggga
ctgcgtgaggtcggcacccggctttcccgtaccgcgagggatctcgacggcaagccgccg
gtgctcgaagtggacagtctggcgatctccttcccggaccggcacaacggggtcgacgtg
gtcgccggggtctcgttctcggtgcgggcgggcgaagtgctcggcctgatcggcgaatcc
gggtgcggcaagtcgctgacctcactgtcgatcatgggcctgcaaccgcgcacggcgaag
gtgtccgggcagatccggttcgcccagcgggacctgctcgcgctgagcccggccgagcgg
cggcgccacctcgggcacgacatctcgatgatctaccaggacgcgctcagctcgctgaac
ccggcgatgaccattcacgcgcagctcaagcagttcacccggcgtggcggcacccgcacg
ccggcggaactgctggaactggtcaacctcgatccacaacggacgctgaaggcctacccg
cacgagctgtccggcgggcagcggcagcgggtgctgatcgcgatggcgttgtcgcgcagt
cccaagctgatcgtcgcggacgagccgaccaccgcgctcgacgtcacggtgcaggcgcag
gtcatcgcgttgctgctgcggttgcaggaggaactcgggttcgcgctgatcctggtctcg
cacgacctcgcgctggtctccgacgtggccgaccgggtggtggtgatgtacggcggccag
gtcgccgagaccggcaccaccgcgcgggtggtcggcgcgccacgccaccactacacccgc
gggctgctcagcgcggtgctgtcgctggaggaaagccaggcgcagctcacccagatcaag
ggcgtggtgccgtcaccggccgaattcggccagggctgccggttcgccgaccggtgcccg
gccgcgcgcgcccgctgccgcaccgaggccccggtccccgccgggcagacgctcgagcac
caggtggcctgccacttccccgccgagatcgatgaggtgcacgcagtgcactggatcgcg
gaaggagcgcggtcgtga
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