Amycolatopsis sp. YIM 10: YIM_28485
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Entry
YIM_28485 CDS
T06270
Symbol
opuCA3
Name
(GenBank) Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_28485 (opuCA3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_28485 (opuCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_28485 (opuCA3)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
YIM_28485 (opuCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
SMC_N
AAA_23
AAA_30
AAA_29
DO-GTPase2
MMR_HSR1
MIC5
cobW
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QFU90871
UniProt:
A0A5P9PRH4
LinkDB
All DBs
Position
5949223..5950026
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AA seq
267 aa
AA seq
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MTIASPSPLLELDRITVRFGGLVALHEVTMEVPPGTVVGVIGPNGAGKTTLFNVICGFVR
PQQGELHWRGERLRSHDPRELAGLGIARTLQGLGLFAGLTVLENVMAGAQKHARAQGFAN
IFGTRKAARDEAALTDRAMNVLRELGVDQYAKAIPRMLPYGVQKRVALARALVAEPAMLL
LDEPASGLSSGEIDELAGRIRQFTDTTSVVVVEHHMDLVMRVCDHIVVLNFGEVIAAGTP
AEVRADPLVTEAYLGADTSENTEARRA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcttccccctcaccgctgctggagctcgaccggatcaccgtgcggttcggc
ggcctggtcgcactccacgaagtcaccatggaggtaccgccgggaacggtcgtcggcgtg
atcgggcccaacggggccggcaaaaccacgctgttcaacgtgatctgcgggttcgtccgg
ccgcagcaaggcgaactgcactggcgcggcgaacgcctgcgcagccacgatccccgcgaa
ctcgcgggtctcggcatcgcgcgcacgctgcaggggctgggcctgttcgccgggctcacc
gtgctggagaacgtcatggcgggcgcgcaaaagcacgccagggcacagggtttcgccaac
atcttcggcacgcgcaaggccgcgcgcgacgaagccgcgctcaccgacagggcgatgaac
gtgctgcgcgaactcggcgtcgaccagtacgccaaggcgatcccccgcatgctgccctac
ggcgtgcagaaacgcgtcgcgctggcgcgggcactggtcgccgaaccggcgatgctgctg
ctcgacgaaccggcgagcgggctgtcctcgggcgagatcgacgagctggccggccgcatc
cgccagttcaccgacaccacctcggtggttgtcgtcgagcaccacatggatctggtgatg
cgggtgtgcgaccacatcgtggtactcaacttcggcgaagtgatcgccgccggtaccccc
gccgaggtccgcgcggaccccttggtgaccgaggcttatctgggcgccgacaccagcgag
aacacggaggcgcgccgtgcttga
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