Amycolatopsis sp. YIM 10: YIM_29980
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Entry
YIM_29980 CDS
T06270
Symbol
rhsC5
Name
(GenBank) Putative deoxyribonuclease RhsC
Organism
amyy
Amycolatopsis sp. YIM 10
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
WXG100
PPE
EspA_EspE
YL1_C
Motif
Other DBs
NCBI-ProteinID:
QFU91162
UniProt:
A0A5P9PST9
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All DBs
Position
6310249..6314718
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AA seq
1489 aa
AA seq
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MPEGNPLVAQAQSQTTGVTGIGIAESAVDLANGVSDGSWVEAGLGAVGVGLEVLSMVVDP
IGTLASYGVSWLIEHVQPLKEALDWLAGDPPVIQSFSETWANVAAEVNAIAGDLGNEVTN
GTAGWQGEGAEAYRGAAAEQADALAGAASLADGISAGVMIMGTVVAAVRELVRDLVAELV
GKLITWALEAAATLGFATPAIAVQATTAITKTISKISDFIRKLVKTIGNVSPKIRKIIDK
LGEIIEKLSKMLRKGGKPGSGTTPSGAKPSTTKTPDTTPNSPDTTPSGTDTTPDGGSPTT
PDGGKPGNGNQPDSPSNRPDDVNDTKTPIDQRKCENDPIDVATGEMVLPQTDVELAGVLS
LVLRRTHISSYRAGLTFGSSWASTVDQRLEFDAEGVLFVAEDGMLLAYPTPPDTGSVLPA
AGPRWPLSRSGDEFTIQRDSGQSLHFPAGAEPVRPLARIEDRSGNRITVHRDRAGTPLAV
EHSGGYRVEFEHEGGRAVALRLADPAGSGIVLLRYAYDERGRLTEVVNSSGRPLRFEYDL
AGRVTKWTDRNGEWYRYFYDAKGRCVANQGSGGFLNGTFGYDDDGRVTRFTDALGNTTTY
RFDERNNVVAETDPLGHTWRQEWDAHDRLVSRTDPLGRSTRYEYDQDGNLTRLTRPDGTQ
ALAEHNELGRPTVTVDPDGAVWRRGYDHAGRVVSITDPSGATTTCTYHENGQLASVTDPL
GRTRRTEVDAAGLPVAEIDVRGGVTRYQRDQFGRIISVTDPSGATARMAWTVEGKLLSRT
APDGSVERWKYDGEGNEVEYQDAAGRGVSIQTTHFDLPAVETRTDGSSLTFTYDAALRLR
AVTNAQNLEWRYDYDAAGRLVAETDFNGRRVQYEHDEAGHLVGRTNGLGQRVGFVRDRAG
RMLQRRYDDTVEVFEYDPVGRLVRARNADADLVLGRDLLGRVISESVNGQAVTSAYDAAG
RRISRRTPTGAQSHWRYGESGQPAALTTAGHTVSFGYDAAGHEVERLLDSGTIIAQSWDA
NHRLASQTVSTVTGGGRAQVIQRRDFSYRADGHLVAVDDQLEGPRSFQLDGGGRITAVRG
AGWSEQYAYDSAGNVQAAGWPGGDTEAHGERAYSGTLLTRAGKLRYEHDQQGRVVLRQKK
RLSAKPESWHYSWNADDRLTGVVTPGGSHWRYLYDPLGRRIAKLRLGHDGTVLERTDFCW
DGLQLAEQVHSGGHALTWDWEPGTFRAIAQVHRVRSAEQGWIDDQFYSIVTDLVGTPTEL
VDASGALGWRRRSTIWGHDIGSAPQQAGTPLRFPGQYFDPESGLNYNHFRHYDAETGRYT
STDPVGLAPAPNPHAYVPNPTAAIDPTGLSPCRTYYSVQGRADADRLINDGGEPWPSGVD
AQGRPRSELGEGLYAWETRDQAERYLDMVRSRDGAPTDLEIIEHRIRGEDFDGLRSADMT
TMDDDAATDLWNQGSNHDYEHIRRGTGRFGPENYFHHSVYHLFETRRPG
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggggaatccgctggtcgcgcaggcgcagtcgcagaccaccggggtgaccggg
atcgggatcgccgagtccgcggtcgacctggccaacggggtgtccgacggctcctgggtc
gaagccggactcggcgcggtcggcgtcggactcgaagtcctctcgatggtcgtcgacccg
atcggcacgctcgcttcctacggtgtctcgtggctgatcgagcacgtgcagccgctcaag
gaggcactcgactggctggccggggacccgccggtgatccagtcgttttccgagacctgg
gccaacgtcgccgccgaggtcaacgccatcgccggcgacctgggcaatgaggtcaccaac
ggcaccgccggctggcagggcgagggtgccgaggcgtatcggggcgcggcggctgagcag
gcggatgcactggcgggtgcggcgtcgctggccgacggcatttccgccggcgtgatgatc
atgggcaccgtcgtcgccgcggtacgcgaactggtccgcgatctggtcgccgaactggtc
ggcaagctcatcacctgggcactggaagccgccgccaccctgggcttcgccacccccgcg
atcgccgtacaggccaccaccgccatcaccaaaaccatcagcaagatcagcgacttcatc
cgcaaactggtcaagaccatcggcaacgtctccccgaagatccgcaagatcatcgacaaa
ctcggcgagatcatcgaaaagctgtccaaaatgctccgcaaaggcggcaaacccggcagc
ggcaccaccccctccggcgccaagcccagcaccaccaaaaccccggacaccacccccaac
tcccccgacaccaccccttccggcaccgacaccacccccgacggcggcagccccaccacc
cccgacggcggaaaaccgggcaacggcaaccagccggactcaccgagcaaccggccggac
gacgtcaacgacaccaagaccccgatcgaccagcgcaagtgcgagaacgacccgatcgac
gtcgcgaccggggaaatggtcctgccgcagaccgacgtcgaactcgccggcgtgctgtcg
ctcgtgctgcgccgcacgcacatctcgtcctaccgggccggcctcaccttcggatcgtcc
tgggccagtaccgtggaccagcggctcgaattcgacgccgagggcgtgctgttcgtcgcc
gaggacggcatgctgctggcctacccgacacccccggacaccggctcggtgctgcccgcc
gcaggcccgcgctggccgctgagccgctccggggacgagttcaccatccagcgcgattcg
gggcagagcctgcacttcccggccggtgcggaaccggtccggccgctggcccggatcgag
gaccgcagcggcaaccggatcaccgtgcaccgcgaccgcgccgggacaccgctggccgtc
gagcactccggtggctaccgggtggagttcgagcacgagggcggccgggccgtcgcactc
cggctcgccgatccggccggttccggcatcgtcctgctgcgatacgcctacgacgagcgc
ggacggctcaccgaggtcgtcaactcctccggccgcccgctgcgcttcgagtacgacctc
gccggccgggtcaccaaatggaccgaccgcaacggcgagtggtaccgctacttctacgac
gccaagggccggtgcgtcgcgaaccagggttccggcggcttcctcaacggcactttcggc
tacgacgatgacggccgcgtcacccgcttcaccgacgcactgggcaacaccaccacctac
cgcttcgacgagcgcaacaacgtcgtcgccgagaccgacccgctcggccacacctggcgg
caggaatgggacgcccacgaccgcctggtcagccgcaccgacccgctcgggcgcagcacg
cgctacgagtacgaccaggacggcaacctgaccaggctgacccgcccggacggcacccag
gcgctggccgagcacaacgaactgggcaggccgacggtcaccgtcgacccggacggcgcg
gtctggcgacgcggctacgaccacgcgggccgcgtggtctcgatcaccgacccctccggt
gccaccacgacctgcacctaccacgagaacgggcagctcgcctcggtcaccgacccgctg
ggccgcacccgccgcaccgaagtggacgcggccgggctgccggtggccgagatcgacgtc
cggggcggggtcacccggtaccagcgcgaccagttcggccggatcatctcggtcaccgac
ccgagcggcgcgaccgcgcggatggcgtggacggtcgagggcaagctgctgtccaggacc
gcccccgacggcagcgtcgaacgctggaagtacgacggggagggcaacgaggtcgagtac
caggacgccgccgggcgcggtgtgtcgatccagaccacgcacttcgacctgcccgcggtg
gagaccaggaccgacggcagcagcctgaccttcacctacgacgccgcgctccggctccgg
gcggtcaccaacgcccagaatctcgaatggcgctacgactacgacgcggcgggcaggctg
gtcgccgagaccgacttcaacggcaggcgggtccagtacgagcacgacgaggcggggcac
ctcgtcgggcgcacgaacgggctcggtcaacgggtcgggttcgtccgcgaccgcgccggg
cggatgctccagcgacgctacgacgacactgtcgaggtcttcgaatacgacccggtgggc
aggctggtccgcgcccgcaacgccgacgccgacctggtgctcggccgggacctgctcggc
cgggtgatctccgagtccgtcaacgggcaggcggtgacctcggcctacgacgcggccgga
cgccggatctcccggcgtaccccgaccggggcgcaatcgcactggcggtacggcgaaagc
gggcagcccgcggcactgaccaccgccgggcacacggtcagcttcggctacgacgcggcg
gggcacgaggtcgagcgcctgctggacagcggcacgatcatcgcccagtcctgggacgcg
aaccaccggctggccagccagacggtgtccacggtgaccggtggcggccgggcgcaggtg
atccagcgacgcgacttcagctaccgcgcggacggccacctcgtcgccgtggacgaccag
ctcgaaggcccgcggtcgttccagctcgatggcggcggccgcatcaccgccgtgcgcggt
gcggggtggagcgagcagtacgcctacgacagcgccggcaacgtgcaggctgcgggctgg
cccggcggcgacaccgaagcccacggcgagcgcgcctacagcggcactctgctcacccgc
gccgggaagctgcgctacgaacacgaccagcaggggcgcgtcgtgctccggcagaagaag
cggctgtccgccaaaccggagagctggcactactcctggaacgccgacgaccggctcacc
ggagtggtcacccccggcgggagccactggcgctatctgtacgacccgctgggcaggcgg
atcgccaagctccggctgggacacgacggcaccgttctcgaacggacggacttctgctgg
gacggcctgcaactcgccgagcaggtgcactccggcggccacgcgctgacctgggactgg
gaaccgggcaccttccgggccatcgcacaggtgcaccgggtgcggtcggccgagcagggc
tggatcgacgaccagttctactcgatcgtgaccgacctggtcggcaccccgaccgaactg
gtggacgcgtccggggcgctgggctggcgccgccggtcgacgatctggggccacgacatc
ggctcggcgccgcaacaggcaggcacgccgctgcgctttcccggccagtacttcgatccg
gagtcaggactcaactacaaccatttccggcactacgacgccgaaaccggccgttacacg
tcgaccgatcccgtggggctggcgccggccccgaacccacacgcctacgtgcccaacccg
accgccgcgatcgacccgaccggcctgtccccctgccgcacctactacagcgtccagggc
agggccgacgccgaccggctgatcaacgacggcggcgagccgtggccgtccggagtggac
gcgcagggcaggccgcgaagtgagctcggcgaaggcctctacgcctgggaaacgcgcgat
caggcggaacgctatctggacatggtccgaagccgcgacggggcgccgaccgacctggag
atcatcgagcaccgcatccggggcgaggacttcgacggactgcggtcggcggacatgacc
acaatggacgatgacgcggcgaccgacctgtggaaccagggaagcaaccacgactacgag
cacatccgccgcgggaccgggcggttcggcccggagaactacttccaccacagcgtctac
cacctgttcgagacaaggaggccgggatga
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