Amycolatopsis sp. YIM 10: YIM_34905
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Entry
YIM_34905 CDS
T06270
Symbol
lptB2
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_34905 (lptB2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_34905 (lptB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_34905 (lptB2)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
YIM_34905 (lptB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_23
AAA_16
AAA
AAA_21
ABC_ATPase
MMR_HSR1
AAA_30
AAA_29
SMC_N
RsgA_GTPase
AAA_22
NB-ARC
DO-GTPase2
cobW
MukB
AAA_15
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFU92142
UniProt:
A0A5P9PVJ7
LinkDB
All DBs
Position
complement(7372306..7373040)
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AA seq
244 aa
AA seq
DB search
MSLVRISGVGKSFRGLRALSDVDLAVDEGEIVGIIGPNGAGKTTLFNVVCGALKPDTGTV
ELAGRDITGASPDRIARAGMVRTFQLMRPFASMTVVQNVSLAAQHRRMPAKRLYEHSLAV
VERVGLGPWAHRLATELPTAGLKRLELARTLAMRPRVLLLDEVLAGLVPAEREPVLDLLA
ELREQDGTTLLFIEHIMAAVMRLSDRVLVLDQGRVLATGSPEEVTSDPRVIDAYLGEEPA
RADS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggtgcggatctcgggcgtcggcaagtccttccgcggcctgcgcgcactgtcc
gatgtggacctcgcggtggacgagggcgagatcgtcggcatcatcgggccgaacggcgcc
ggcaagaccacgctgttcaacgtggtgtgcggggcgctcaaaccggacaccggcacggtg
gagctggccgggcgcgacatcaccggcgcctcacccgaccgcatcgcgcgcgccggcatg
gtgcgcacgttccagctgatgcgcccgttcgccagcatgaccgtggtgcagaacgtcagc
ctcgccgcgcagcaccgccggatgccggcgaaacggctgtacgagcattcgctggccgtg
gtcgagcgggtcgggctgggcccgtgggcgcaccgactggccaccgaactgcccaccgcc
gggctcaagcgcctcgaactggcccgcacgctggccatgcgcccgcgggtgctgctgctc
gacgaggtgctggccgggctggtgcccgcggaacgggagccggtcctcgacctgctcgcc
gagctgcgtgagcaggacggcaccacgctgctgttcatcgagcacatcatggccgcggtg
atgcggttgtccgaccgggtgctggtgctggaccagggtcgcgtgctggccaccggttcg
ccggaggaggtcaccagcgatccacgggtgatcgacgcctatctcggggaggagcccgcc
cgtgctgactcttga
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